DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34274 and cns1

DIOPT Version :10

Sequence 1:NP_001097807.1 Gene:CG34274 / 5740212 FlyBaseID:FBgn0085303 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_594238.1 Gene:cns1 / 2542172 PomBaseID:SPAC17A2.04C Length:358 Species:Schizosaccharomyces pombe


Alignment Length:167 Identity:40/167 - (23%)
Similarity:72/167 - (43%) Gaps:32/167 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 FMRQIDSEPDD----------RVLARE-QREDVAETFRRMGNYEYRKLNFSLAKDYYSKGI-QYI 163
            ||:.::...|:          :.||.| :..:||:.||..||..:....:..|:::|:|.: |..
pombe    31 FMQSLEDVGDESENNVQLDALKALAYEGEPHEVAQNFREHGNECFASKRYKDAEEFYTKALAQKC 95

  Fly   164 KDSPV---LYVNRALCFIKLREFKLGIIDCDYVLAKIDEHYLRAWLYRAA----AYKRLND---- 217
            .|..:   .|.|||.|.:....::..:.||..||.: |..:.:|: ||:|    |.||.::    
pombe    96 GDKDIEIACYSNRAACNLLFENYRQVLNDCAQVLQR-DSTHAKAY-YRSAKALVALKRYDEAKEC 158

  Fly   218 -------EPNFEYSVDRARRFNRSDADFIDEFLDKMR 247
                   .||....:..::...:...||.....:|.|
pombe   159 IRLCSLVHPNDPAILALSKELQKKSDDFEKRESEKKR 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34274NP_001097807.1 3a0801s09 118..>215 CDD:273380 31/115 (27%)
TPR repeat 133..161 CDD:276809 8/28 (29%)
TPR repeat 166..197 CDD:276809 9/33 (27%)
cns1NP_594238.1 NlpI 35..194 CDD:443815 36/160 (23%)
TPR repeat 64..92 CDD:276809 8/27 (30%)
TPR repeat 97..131 CDD:276809 10/33 (30%)
TPR repeat 136..160 CDD:276809 7/24 (29%)
CTWD_TTC4 200..348 CDD:439175
Blue background indicates that the domain is not in the aligned region.

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