DRSC/TRiP Functional Genomics Resources

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Protein Alignment clos and Tspear

DIOPT Version :10

Sequence 1:NP_001097246.3 Gene:clos / 5740204 FlyBaseID:FBgn0261016 Length:1836 Species:Drosophila melanogaster
Sequence 2:NP_001418967.1 Gene:Tspear / 365546 RGDID:1563108 Length:672 Species:Rattus norvegicus


Alignment Length:429 Identity:95/429 - (22%)
Similarity:162/429 - (37%) Gaps:143/429 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 LDICILQLPTV-KYATALHKNAAGVRHFAVYTWRPAE-QDYQLLVELETPKAVALDCLAFAGRGY 137
            |.|.:..:|.| .:|.|.::.|..    |:|.|...: ..||   .:.|.:|.:........:.:
  Rat   331 LGIEVFNIPGVGLFAAAANRKARS----AIYKWSDGKFVSYQ---NIATHQAQSWRHFTIGKKIF 388

  Fly   138 VAVSYNLTEPVSQAREGSPIYEISPETGIRTVQYFSGTHLRGMYLRISSQELTLLHAFESNAQCP 202
            :||: |. .|..:.:|.|.||:.||    |.:::                  ||           
  Rat   389 LAVA-NF-GPNERGQEFSVIYKWSP----RKLKF------------------TL----------- 418

  Fly   203 YFKWMGKSFQRLGAIHCSKARRMEAFGIDYTDYVAVANYADAEGRTATHSEIFRWDAKSQRFQLF 267
                    :||: |.|  .||..|||.:|...::.|||:.:.:... ..|.::||:..||.|:..
  Rat   419 --------YQRI-ATH--SARDWEAFEVDGEHFLVVANHREGDNHN-IDSVVYRWNPSSQLFEAN 471

  Fly   268 QRLRSNGAVDVKYFSLPVNEVSRRHFLILGNTIGGTGAEVGDADTVIYVFEKGQFVPYQR-LSFY 331
            |.:.::||.|.::|:     |....||::.||..||..:|   .:.:|::..|.|..:|. |:|.
  Rat   472 QSIATSGAYDWEFFT-----VGPYSFLVVANTFNGTSTQV---HSHLYIWLVGAFQLFQSFLTFG 528

  Fly   332 ALERVLPVQHSISEKFLLLVA-CNKQDVK-------------IYNLN------------------ 364
            |.:  ..|.| |.|:..|.|| .:..||:             ||.||                  
  Rat   529 AAD--WEVFH-IGERIFLAVANSHSYDVQMQAQNDTYILSSVIYELNVTAQTFVKFQDIPTCSAL 590

  Fly   365 DWRFEESKVQFTEGALSRGVARMRSYEEGDQSYLVIANENMAANETNIFQPLYKQDEHANILRQQ 429
            ||.|                     :..|:..:||:|| :...|..::...:|:...:...:...
  Rat   591 DWEF---------------------FSVGEDHFLVVAN-SFDGNTFSVNSIIYRWQGYEGFVAVH 633

  Fly   430 II------DW---------------AREQRKRLEQMNLD 447
            .:      ||               |:|...|:.::..|
  Rat   634 KLPTFGCRDWEAFNTTAGSYLIYSSAKEPLSRVLKLRTD 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
closNP_001097246.3 EPTP 263..315 CDD:461033 14/51 (27%)
TspearNP_001418967.1 LamG <73..225 CDD:473984
EPTP 363..409 CDD:461033 12/50 (24%)
EPTP 415..461 CDD:461033 16/86 (19%)
EPTP 468..513 CDD:461033 15/52 (29%)
EPTP 518..570 CDD:461033 15/54 (28%)
EPTP 578..623 CDD:461033 10/66 (15%)
Blue background indicates that the domain is not in the aligned region.

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