DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kmr and plekha6

DIOPT Version :10

Sequence 1:NP_001097775.2 Gene:kmr / 5740131 FlyBaseID:FBgn0085412 Length:3090 Species:Drosophila melanogaster
Sequence 2:XP_031751404.1 Gene:plekha6 / 100036696 XenbaseID:XB-GENE-958530 Length:1245 Species:Xenopus tropicalis


Alignment Length:1468 Identity:314/1468 - (21%)
Similarity:480/1468 - (32%) Gaps:438/1468 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 PGSE----HGTVYIQQNHPNHVVNQACQTQISA-VKPKATP-----SSEESSSNSTKS------- 341
            |.:|    .|....|:.|.:|:.  ..|..::. :..|:.|     |||.|....|..       
 Frog    27 PAAETLCSQGPSCSQKCHNDHLA--TVQHSVTVLISRKSGPLWFDMSSETSGKRCTSQVNESSAF 89

  Fly   342 --PSHAPLD-------RKKSAGSIQALKSPITKRPPSTPVTLSGWLHKQGSDGLKVWRKRWFVLA 397
              .|.:||:       |....|.....:|...||.|:..|..:|||:||.|.|:|.|.||||||.
 Frog    90 SMVSDSPLEGSIIRPSRLSKKGIAFGKRSNSMKRNPNAEVMKTGWLYKQASSGVKQWNKRWFVLV 154

  Fly   398 EYCLYYYKGPEEEKLLGSVLLPSYRVSACLPEDKIYRKFAFK--------------------CEH 442
            :.||:|||..:||.:|||:.|.|:.::...|.|.|.||..||                    .||
 Frog   155 DRCLFYYKDEKEEVILGSIPLLSFCIAPVQPSDNISRKHTFKVTVCCIGGVSLNNTAPISRQAEH 219

  Fly   443 QNMRTYWLAADNSEAMMQWVRALAAASLMQAPSSGESEPSVNSSLNHSGENSDSGIHTLQSHPGK 507
            ..:|||:.:|:|.|....|:..:..||.:|..::...|       ....||..|   |....|  
 Frog   220 AGIRTYFFSAENREEQESWICVMGEASQVQNLATPRME-------KQDSENIPS---TKDREP-- 272

  Fly   508 GQPTPSSENTGSSGGGSGSGQPLYANAPPKPR----RINDGGYSSPSPEHNEQQQQHPSRRLMSP 568
                    .|.|.|.|.|.|...:.|.....:    ::|..|.....|...:..:..|       
 Frog   273 --------ETRSRGEGDGRGSEKFENRSECKQEFLTKVNGRGVPPDRPPDLQPPRHFP------- 322

  Fly   569 TQQLYQQQQHQRSQQQQQQQPQQHHAIYDTRTGH-VSTALQLQQAQQQYSLDHLEAQFQQQQLDM 632
                           :.:|.||.:...:....|. .|||....|.:......|.|...|:|    
 Frog   323 ---------------EGEQPPQPNGWGFPPSPGRPASTAFSEGQRRGNLPRTHPEKVAQRQ---- 368

  Fly   633 EEQIARLQQ----QRAAEEIYGEREMYMAKLMQQRQGPNGTYPTQQQLLQAERRTPDAYGRSKQQ 693
             ..:::|||    :|||                   ||.....:..:.....||.|:.|.:...|
 Frog   369 -NSMSQLQQWVNLRRAA-------------------GPTEEIQSPSRFFSESRRIPECYSQCPSQ 413

  Fly   694 RL----FAAAAAAADYEDIYNMSQLAGGGGVPMSAQEALLQ--------------EAASYRRPLS 740
            .|    :.::.|.:..:.|.:|...  ..|||....|...|              ||.||.|   
 Frog   414 YLDGYQYYSSPAGSRPDSICSMPIF--DRGVPQWGAEDKRQIHHKLVPYYPRDWNEAGSYGR--- 473

  Fly   741 PPSYDGSKHVPAMPQRYTPNHLEASAADQLINTMDLRARTAAAIVRPHSADFLEYEARAEAAAAA 805
                .....||. ||.|   :.|..||.:.:..:.|:.| :.::.|.:|.....|          
 Frog   474 ----QTEMWVPC-PQLY---YQETDAACESLRHLSLQPR-SRSVPRSNSQGTYNY---------- 519

  Fly   806 AAAAVAQSQQESGRAPR-------PKSSLDINRTPDSFYYSEASYADKMRKSALYLQSGGAGAAQ 863
                         ..||       |.:..| ..|.:..:...|:|.  ||:|....:.|..|...
 Frog   520 -------------TRPRVYSPVRSPSARFD-GVTREDIFGDPAAYT--MRRSVSSPKYGYIGDRH 568

  Fly   864 PQQPGSYRTT---------------------GADF-----------NSGVNTI------------ 884
            |.|.|.|..:                     ..||           .|.||.:            
 Frog   569 PHQAGVYSYSYPASPPLHDKMDEMLDLQLQRHLDFLDQQMSESETLISMVNNMVHSSPRAQIFMQ 633

  Fly   885 --GYENPYERA---YKRQE-----LLAEAQGGGASSMPRMSRSASQGRSVASQLQSPQQEDLPPL 939
              .|.:||..|   ||..|     ||.:.              ..|.::|..|.:..||     |
 Frog   634 VSPYSDPYREALQSYKINEHDTDKLLGQL--------------CEQHKAVREQDRLVQQ-----L 679

  Fly   940 NVHPGSIFPPSMSTQEIISKNEQFLRSAS--ARLPKRSGGMDDDYSAGNSTTTSPTGGAGASNSP 1002
            .....|:....|.|.:   :.|.|....:  ..|..|...:.:...:.....:..|.....|:..
 Frog   680 RAEKESLESALMGTHQ---EMEMFGNQTAFPENLLHRKESLQNQLISIRVELSQATTALNNSSLE 741

  Fly  1003 QHNLDGERKREESMKRLLE--WKQRML--QSPLTRKGIQQG----GSNMSAMSKLGSNPNILLAS 1059
            ...|:||      :..|.:  |:|..|  |:.|..:.||:.    ...|..:.|  :||:     
 Frog   742 YEALEGE------VSALHDTLWEQLNLNIQNELMNRQIQREIWRIQDVMEGLRK--NNPS----- 793

  Fly  1060 TAVASGARYAPQAGKTVLVGNGNGTAQGAGNP-PSASGIQRSRSESQANVGPGGVVYNNYSSDDE 1123
                                .|..||:....| |||:                      :||:..
 Frog   794 --------------------RGTDTAKHRVLPGPSAT----------------------FSSNSP 816

  Fly  1124 AGTVDDDNLYSATAG---RSSSSKTTTKATTSQ-AIVATTTAALAITNLGS-SKNLETPNQTETE 1183
            |..:...:|.|..:.   .|.|..:.||.|||: :........|:.|.|.| |..|..|.:...:
 Frog   817 ASPISSASLTSPLSPFSLISGSQGSPTKQTTSEDSGPPRPPLPLSYTPLDSPSDVLPLPGEGCFQ 881

  Fly  1184 ATP-SSSSTASSTKAKFQLKPILKVHEASKTRIIQVQPKHLEERPKLR-LQLPKAMGNEEEQKQE 1246
            ..| ..||....::.|..|:|.       |...:|:......||  || ||..        .:.|
 Frog   882 PWPYPLSSCWLHSELKMNLEPY-------KRESLQLSSSLTPER--LRSLQFC--------SEHE 929

  Fly  1247 DEEQENVEAE---PVPILPKKTAPKSPQNANYVPVYNNKLVSNYENMEFGKPIPESKIPHSNAAI 1308
            .|:|:.|..:   .|.|:|..|...:...:...|....:..|...|....:..|:|.:       
 Frog   930 SEKQQQVPLQVINKVGIVPPITKSHNEDESEMKPSVVRREGSRTPNGNISRERPKSAL------- 987

  Fly  1309 TDPEETPMLMQLKLFKEQQDQQKQQQENEEEDLTPTAESKPIPGEEDMGAPKVIKDQKLESNEEE 1373
             .|.|....|.:   :||.|:.|:.|       |.:.:.|.             :..:|.:|::.
 Frog   988 -FPSEVKSKMSV---EEQNDRMKRHQ-------TGSVKEKR-------------RSLQLLANQQS 1028

  Fly  1374 QELEDEDDST--------ACEEYTDDDIDEALAQDDEDEAVVEAVESQELAEERELQQIYVNEPI 1430
            :....:...|        :..|....|: ||:.:..|.:...|:.: .|:|..|:::       :
 Frog  1029 EHSATKSTGTYRIVRRHRSVHEVDISDL-EAVLRSQEPQHTYESPQ-DEIARLRKME-------V 1084

  Fly  1431 TPTDQQFDESHYLPM-----TPKKV-------ELGQPGVLTLVSATYAEEEEENHYVEMTKGIQD 1483
            .|.....|.:..||:     ||:||       ||...|.|     :..|.:|:...||..|.:..
 Frog  1085 EPQSYSVDITRELPVPDKLSTPEKVLIPERYIELEPEGPL-----SPEEMQEKRRKVERIKTLIA 1144

  Fly  1484 EDCRSNYEIMCLASTSSSAFKVTTKTEPVYMELAGVKASSAVPATEEAHCSSGRSTLKKCKKSGT 1548
            :....|     :...|.|..:||...|....|.......|...|.|.:.  .||.....|.....
 Frog  1145 KSSLQN-----VIPLSDSELEVTPDPESQLQEQEKRIELSCTLAAEASR--RGRLLSALCATPSP 1202

  Fly  1549 ETLKKKTKKRQGKDMPDIL--KPAKSALALASDSSDAD 1584
            .|..|       ...|..|  .|..|||...:.|..:|
 Frog  1203 PTSPK-------SPAPQTLSSSPEHSALGGGNSSRSSD 1233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kmrNP_001097775.2 PH_PEPP1_2_3 366..469 CDD:270068 46/122 (38%)
plekha6XP_031751404.1 PH_PEPP1_2_3 123..246 CDD:270068 46/122 (38%)
PHA03377 <240..>580 CDD:177614 88/445 (20%)

Return to query results.
Submit another query.