DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34454 and spink4

DIOPT Version :10

Sequence 1:NP_001097457.1 Gene:CG34454 / 5740130 FlyBaseID:FBgn0085483 Length:133 Species:Drosophila melanogaster
Sequence 2:NP_001314828.2 Gene:spink4 / 100331208 ZFINID:ZDB-GENE-130821-1 Length:76 Species:Danio rerio


Alignment Length:62 Identity:19/62 - (30%)
Similarity:24/62 - (38%) Gaps:15/62 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 PAPAPTKEFLNCFGNCPTTSQYNPICGSNMQLYMNE-----EKFNCARFCGADIQIVRRGSC 124
            |..|...|.|.|..|..      |:|||:...|.||     |:....    :||.|.:.|.|
Zfish    25 PTCAGMPEILACPMNLA------PVCGSDGNTYSNECLLCVERLKTK----SDILIAKDGDC 76

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34454NP_001097457.1 KAZAL_FS 86..124 CDD:412159 12/42 (29%)
spink4NP_001314828.2 None

Return to query results.
Submit another query.