DRSC/TRiP Functional Genomics Resources

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Protein Alignment SALL4 and jim

DIOPT Version :9

Sequence 1:NP_065169.1 Gene:SALL4 / 57167 HGNCID:15924 Length:1053 Species:Homo sapiens
Sequence 2:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SALL4NP_065169.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..62
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..149
zf-C2H2 382..404 CDD:306579
C2H2 Zn finger 384..404 CDD:275368
zf-H2C2_2 396..421 CDD:316026
C2H2 Zn finger 412..432 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 483..546
C2H2 Zn finger 568..588 CDD:275368
zf-H2C2_2 580..605 CDD:316026
C2H2 Zn finger 596..619 CDD:275368
zf-C2H2 626..648 CDD:306579
C2H2 Zn finger 628..648 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 694..714
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 736..776
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 788..828
C2H2 Zn finger 872..892 CDD:275368
zf-C2H2 872..892 CDD:306579
zf-H2C2_2 884..909 CDD:316026
C2H2 Zn finger 900..920 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1018..1039
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368
COG5048 355..666 CDD:227381
zf-C2H2 357..379 CDD:278523
C2H2 Zn finger 359..379 CDD:275368
zf-H2C2_2 371..396 CDD:290200
C2H2 Zn finger 387..407 CDD:275368
zf-H2C2_2 400..424 CDD:290200
C2H2 Zn finger 415..435 CDD:275368
C2H2 Zn finger 527..547 CDD:275368
zf-C2H2 553..575 CDD:278523
C2H2 Zn finger 555..575 CDD:275368
C2H2 Zn finger 583..603 CDD:275368
zf-H2C2_2 596..620 CDD:290200
C2H2 Zn finger 611..631 CDD:275368
zf-H2C2_2 624..650 CDD:290200
C2H2 Zn finger 639..661 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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