DRSC/TRiP Functional Genomics Resources

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Protein Alignment SALL4 and CG10654

DIOPT Version :9

Sequence 1:NP_065169.1 Gene:SALL4 / 57167 HGNCID:15924 Length:1053 Species:Homo sapiens
Sequence 2:NP_001261767.1 Gene:CG10654 / 39428 FlyBaseID:FBgn0036294 Length:412 Species:Drosophila melanogaster


Alignment Length:81 Identity:27/81 - (33%)
Similarity:44/81 - (54%) Gaps:1/81 - (1%)


- Green bases have known domain annotations that are detailed below.


Human   567 ECLICHRVLSCQSSLKMHYRTHTGERPFQCKICGRAFSTKGNLKTHL-GVHRTNTSIKTQHSCPI 630
            ||.||||.....|.|:.|.:.|.|.||:.|..|.::::....|::|| .:|....:.:..::||.
  Fly   227 ECRICHRGFYKPSLLEAHMQQHEGLRPYTCVHCAKSYARANLLESHLRQMHNNADAARIIYACPS 291

Human   631 CQKKFTNAVMLQQHIR 646
            |.|.:|....|:.|:|
  Fly   292 CNKVYTANRSLKYHMR 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SALL4NP_065169.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..62
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..149
zf-C2H2 382..404 CDD:306579
C2H2 Zn finger 384..404 CDD:275368
zf-H2C2_2 396..421 CDD:316026
C2H2 Zn finger 412..432 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 483..546
C2H2 Zn finger 568..588 CDD:275368 8/19 (42%)
zf-H2C2_2 580..605 CDD:316026 8/24 (33%)
C2H2 Zn finger 596..619 CDD:275368 6/23 (26%)
zf-C2H2 626..648 CDD:306579 8/21 (38%)
C2H2 Zn finger 628..648 CDD:275368 8/19 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 694..714
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 736..776
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 788..828
C2H2 Zn finger 872..892 CDD:275368
zf-C2H2 872..892 CDD:306579
zf-H2C2_2 884..909 CDD:316026
C2H2 Zn finger 900..920 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1018..1039
CG10654NP_001261767.1 zf-AD 39..115 CDD:285071
C2H2 Zn finger 228..248 CDD:275368 8/19 (42%)
C2H2 Zn finger 256..313 CDD:275368 14/52 (27%)
C2H2 Zn finger 289..314 CDD:275368 8/19 (42%)
zf-C2H2 323..345 CDD:278523
C2H2 Zn finger 325..345 CDD:275368
C2H2 Zn finger 355..376 CDD:275368
C2H2 Zn finger 385..405 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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