DRSC/TRiP Functional Genomics Resources

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Protein Alignment PSMA5 and Prosalpha4T1

DIOPT Version :10

Sequence 1:NP_002781.2 Gene:PSMA5 / 5686 HGNCID:9534 Length:241 Species:Homo sapiens
Sequence 2:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster


Alignment Length:237 Identity:80/237 - (33%)
Similarity:136/237 - (57%) Gaps:10/237 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     6 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEI 70
            |.|.|.:..|||:|.|.|||||.||::.||||:|::.:..|.|.|||...|.:.|..::.||..:
  Fly     3 SRYGRALTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKSSVSEMQEDRTVRKISML 67

Human    71 DAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSR 135
            |.|:..|.:||.|||:.||::.:||.|:|...:...:|:|.:|:.::.|..::.:.:.     .|
  Fly    68 DRHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNG-----RR 127

Human   136 PFGVALLFGGVDEKG-PQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVY--HKSMTLKEAIKS 197
            |||::.|.||:|..| .:|||.:|||.|.:..|.|.|..:...:...::.|  |:..|..:|||.
  Fly   128 PFGISCLIGGIDADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKL 192

Human   198 SLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVIK 239
            ::..|.:|.:  ::...:|:|.::.|:...|.....:.|::|
  Fly   193 AMRALLEVTQ--MSQMRLEVAVLENGKPMKMLDSVVISEIVK 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PSMA5NP_002781.2 proteasome_alpha_type_5 8..220 CDD:239722 75/214 (35%)
Prosalpha4T1NP_650910.1 proteasome_alpha_type_7 5..213 CDD:239724 75/214 (35%)

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