DRSC/TRiP Functional Genomics Resources

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Protein Alignment PSMA5 and Prosbeta4

DIOPT Version :10

Sequence 1:NP_002781.2 Gene:PSMA5 / 5686 HGNCID:9534 Length:241 Species:Homo sapiens
Sequence 2:NP_609804.1 Gene:Prosbeta4 / 34999 FlyBaseID:FBgn0032596 Length:201 Species:Drosophila melanogaster


Alignment Length:219 Identity:47/219 - (21%)
Similarity:77/219 - (35%) Gaps:72/219 - (32%)


- Green bases have known domain annotations that are detailed below.


Human    36 TAIGIQTSEGVCLAVE----KRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVET 96
            |.:||:..:.|.||.:    :.|.....:.:.|.|:.:         |.||:             
  Fly     3 TLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKVSD---------SLLIS------------- 45

Human    97 QNHWFTYNETMTVESVTQAVS-NLAL---------------QFGEEDADPGAMSR-PFGVALLFG 144
                 |..|:...|..|:.:| |:||               .|..::......|| |:.|.:...
  Fly    46 -----TVGESGDTEQFTEFISKNIALYKMRNGYDLSPRESAHFTRKNLAEYLRSRTPYQVFMFVA 105

Human   145 GVD-EKGPQLFHMDPSGTFVQ--CDARAIGSASEG-----AQSSLQEVYHKSMTLKEAIKSSLII 201
            |.| ..||:|       ||:.  .:|..:..|..|     |.|.....:|.::|..||..    :
  Fly   106 GYDPNAGPEL-------TFIDYLANALPVNYAGHGYGAIFASSIYDRYWHPNITQAEAYD----V 159

Human   202 LKQVMEE-----KLNATNIELATV 220
            .|:.:.|     .:|..|..:|.|
  Fly   160 FKKCIAEIQKRLVVNLKNFTVAVV 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PSMA5NP_002781.2 proteasome_alpha_type_5 8..220 CDD:239722 46/217 (21%)
Prosbeta4NP_609804.1 proteasome_beta_type_2 1..192 CDD:239727 47/219 (21%)

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