DRSC/TRiP Functional Genomics Resources

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Protein Alignment PSMA5 and Prosbeta4R1

DIOPT Version :10

Sequence 1:NP_002781.2 Gene:PSMA5 / 5686 HGNCID:9534 Length:241 Species:Homo sapiens
Sequence 2:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster


Alignment Length:188 Identity:43/188 - (22%)
Similarity:73/188 - (38%) Gaps:16/188 - (8%)


- Green bases have known domain annotations that are detailed below.


Human    36 TAIGIQTSEGVCLAVE-KRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNH 99
            |.:|::.::.:.||.: .|..|.:.....:.|...|..:...:.:|...|.....|........:
  Fly     3 TILGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMSTAGDGGDCLKFSDFILRNMDLY 67

Human   100 WFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVD-EKGPQLFHMDPSGTFV 163
            ..|....:||......:......:.:.|.       .|.|:||.||.| ..||:|.::|..|..|
  Fly    68 KITNGYDLTVRGAVHFIRRHLSAYLKSDC-------TFQVSLLVGGYDLTSGPELHYIDYLGNSV 125

Human   164 QCDARAIGSASEGAQSSLQEVYHKSMTLKEA---IKSSLI-ILKQVMEEKLNATNIEL 217
            .......|:|.......|:|.|...|..:.|   ||..:| :.|:.:   :|..||:|
  Fly   126 PVRYGGHGAAMNFCTPILEEFYKPDMDTQAAYDVIKKCVIELYKRFV---INLRNIDL 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PSMA5NP_002781.2 proteasome_alpha_type_5 8..220 CDD:239722 43/188 (23%)
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 43/188 (23%)

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