DRSC/TRiP Functional Genomics Resources

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Protein Alignment pins and Ttc29

DIOPT Version :10

Sequence 1:NP_524999.2 Gene:pins / 53569 FlyBaseID:FBgn0040080 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_898919.3 Gene:Ttc29 / 73301 MGIID:1920551 Length:471 Species:Mus musculus


Alignment Length:388 Identity:84/388 - (21%)
Similarity:142/388 - (36%) Gaps:124/388 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 SMCLELALEG---------------ERLCKAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNA 90
            |:|:::..:|               ::|.:|  .:|...|:|.         |.|.....:|.|.
Mouse    67 SICVDMLRDGFHKSFTELFALMEQWDKLREA--AKAQSLFWQQ---------RPLEDQPDKLDNF 120

  Fly    91 YFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEA-----AICC------ 144
            |.|              ||.|::     .|.|            |.::|.     |:.|      
Mouse   121 YHY--------------LTRAEA-----AERK------------GYYEEVYNNLYALACYFDNSE 154

  Fly   145 ---------ERHLTLARQL---GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRA 197
                     ||...:|:.:   |.: .|..|..::|.::..:|:                 |.:|
Mouse   155 DKWVRNHFYERCFNIAQLIKADGGK-KEAEAESHMGLLFEEEGE-----------------LLKA 201

  Fly   198 VEFYQENLKLMRDLGDRGAQGR-----ACGNLGNTYYLLG-------DFQAAIEHHQERLRIARE 250
            .|.|:...:|......:...|:     ||.:|..||.||.       |::.||:...:...||||
Mouse   202 AEHYEAFHELTHGRLWKDGTGQLLNLVACESLVRTYRLLSDRMLENKDYKQAIKILIKASEIARE 266

  Fly   251 FGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLL---- 311
            ..||:.|..|:..||.:|:..|::|.|.....|...::..|.:.       :.||..|..:    
Mouse   267 GNDRSMEGEASYYLGLAHLASGEYETALTVLNRYSEISTSLDDD-------HGLGRAYEAIAKAL 324

  Fly   312 ---HEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALKYAEQHLQLAKEL 371
               .|...||.|..:.:.||:.....:...|||..||:.::..|.:.:|.:|.:|....|.||
Mouse   325 QSQGETTEAINYLEKFVTIARNNLQSLDMIRACTMLGDIYNEKGQYSKASEYFQQAFSTAMEL 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pinsNP_524999.2 TPR 50..261 CDD:440225 52/260 (20%)
TPR repeat 83..109 CDD:276809 4/25 (16%)
TPR repeat 120..150 CDD:276809 8/49 (16%)
TPR 162..>373 CDD:440225 56/229 (24%)
TPR repeat 162..199 CDD:276809 5/36 (14%)
TPR repeat 219..246 CDD:276809 10/38 (26%)
TPR repeat 251..291 CDD:276809 11/39 (28%)
TPR repeat 296..326 CDD:276809 7/36 (19%)
TPR repeat 338..366 CDD:276809 9/27 (33%)
GoLoco 468..488 CDD:460481
GoLoco 552..573 CDD:460481
GoLoco 613..633 CDD:460481
Ttc29NP_898919.3 TPR 1. /evidence=ECO:0000250|UniProtKB:Q8NA56 92..131 14/68 (21%)
TPR 2. /evidence=ECO:0000250|UniProtKB:Q8NA56 136..173 6/36 (17%)
TPR 3. /evidence=ECO:0000255 182..215 8/49 (16%)
LapB <234..381 CDD:442196 41/153 (27%)
TPR 4. /evidence=ECO:0000255 234..267 10/32 (31%)
TPR repeat 234..262 CDD:276809 7/27 (26%)
TPR 5. /evidence=ECO:0000255 274..307 8/32 (25%)
TPR repeat 275..308 CDD:276809 8/32 (25%)
TPR repeat 313..343 CDD:276809 7/29 (24%)
TPR 6. /evidence=ECO:0000255 314..347 8/32 (25%)
TPR 7. /evidence=ECO:0000255 354..387 10/32 (31%)
TPR repeat 354..380 CDD:276809 8/25 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 449..471
Blue background indicates that the domain is not in the aligned region.

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