Protein Alignment: larp and LARP1b

• Sequence 1: NP_001247347.1
• Gene: larp
• FlyBaseID: FBgn0261618
• Length: 1673
• Species: Drosophila melanogaster
• Sequence 2: NP_201411.2
• Gene: LARP1b
• AraportID: AT5G66100
• Length: 453
• Species: Arabidopsis thaliana
• Alignment Length: 437
• Identity: 104/438 (24%)
• Similarity: 174/438 (40%)
• Gaps: 99/438 (23%)

  Fly   436 TKKQQSAKTAAAVAASSNTTSSE--------VATESNVAGTTSSSNSNPSSSTTTTNTTTNSQAT 492
            |....:|.:|:..:..|:.:.|.        :.::|:...|.|.|..:|.|:.:.:..|.|:
plant     4 TTASSAANSASRFSIDSSISRSRHGDSSPWLLPSDSHDHPTLSLSQDDPFSAPSVSPPTGNN--- 65

  Fly   493 TAPVASTSHDAKAQRDAEPAANSAAGTTGTAAGPALTKKIPKHKWRPLPIDLAKSSRPKPIGGRP 557
                 |:.:| .|.:...|..|..:..:.:..||.:.   ....|..|.:. |:||..|......
plant    66 -----SSDYD-NADKKPPPVWNMPSSNSSSDVGPVMG---AAESWPALSLS-ARSSSIKSPSLDA 120

  Fly   558 NRRFSDDIADQRRPPRVYHDRQPGA-GGAGV------ESRHPHAGRHPYGSRPATATSERVDSWR 615
            ::.|.|..:....||:...:....| .|:.|      .|...::.|.|:.....|::|.
plant   121 SKPFPDGSSSSIPPPQATSNTSTNANAGSSVSATSSENSAVNNSQRKPFRRNNNTSSSS------ 179

  Fly   616 SSSSTTTAA----FDEQRSGAAGGAGAAGT--------GVGSATRGPRRY---RTPYRGGRQGRG 665
            :||:.:.||    .|:..|...||:..:|.        ...|..||...:   |..|..|.|  .
plant   180 TSSNVSNAAPLNTRDQNHSQRGGGSFGSGNFRNSQRNRNSSSYPRGEGLHHGNRRNYEHGNQ--S 242

  Fly   666 GFSRQG---------PGRPTYRI-PRHLLASGEY----ANYLPADAAGA-------DSQSSYVLM 709
            |||.:.         |.|....| |:.|:....:    |.|:.|...|:       ...:.:|.|
plant   243 GFSHRNYSGRDMHLQPQRGVGMIRPQMLMGPPSFPASSAQYMAAPQLGSYGGPIIYPDYAQHVFM 307

  Fly   710 GTH-----------------YFGNVPAAYIELDANSIKEAIKKQVEYYFSVDNLTGDFFLRRKMD 757
             .|                 ||.|..|.        :...|..|||||||.|||:.|..||.:|:
plant   308 -PHPSPDPMGLVGPFPLQPMYFRNFDAI--------LYNKILTQVEYYFSADNLSRDEHLRDQMN 363

  Fly   758 PEGYIPVTLIASFHRVLALTTDVAVIVNAIKESDKLELFEGYKVRTK 804
            .||::||.:||:|.|:..||.::..|:.|::.|:.:|: :|..:|.:
plant   364 DEGWVPVRVIAAFRRLAELTNNIQTILEALRSSEVVEI-QGETLRRR 409

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
larp	NP_001247347.1	LARP_1_2	730..803	CDD:153403	31/73 (42%)
		DM15	1341..1382	CDD:128927
		DM15	1383..1421	CDD:128927
LARP1b	NP_201411.2	LAM	336..409	CDD:153396	31/74 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100			O	PTHR22792
Phylome	0	0.000	Not matched by this tool.
	1	1.100