Protein Alignment: larp and LARP6a

• Sequence 1: NP_001247347.1
• Gene: larp
• FlyBaseID: FBgn0261618
• Length: 1673
• Species: Drosophila melanogaster
• Sequence 2: NP_851141.1
• Gene: LARP6a
• AraportID: AT5G46250
• Length: 422
• Species: Arabidopsis thaliana
• Alignment Length: 554
• Identity: 105/555 (19%)
• Similarity: 175/555 (32%)
• Gaps: 225/555 (41%)

  Fly   688 EYANYLPAD-------AAGADSQSSYVLMGTHYFGNVPAAYIELDA-----NSIKEAIKKQVEYY 740
            |..|..|:|       .:|.|....:        |..|   :|.|.     :.:.:.|.:|||||
plant    61 EIPNLSPSDDDFDHERNSGEDRDQDH--------GENP---VETDGVVVPIDELNQKIIRQVEYY 114

  Fly   741 FSVDNLTGDFFL--RRKMDPEGYIPVTLIASFHRVLALTTDVAVIVNAIKESDKLELFEGYKVRT 803
            ||.:||..|.||  ..|.:.:|::|::.||:||::..||.|.|:||:|:|||..|.:....|...
plant   115 FSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFLVVSADEKKVK 179

  Fly   804 KTTPTTWPITEVPEVNEGEPKAIGTLEQEQLEQNDGQEKLEEQTEADSPPPILTSAMATKPLNSI 868
            :.:|       :||:.  :|| |.|:..|.|.::...|.:.|
plant   180 RLSP-------LPEIR--DPK-IFTVLVENLPEDHSNENIRE----------------------- 211

  Fly   869 PPPPMPRNPQNLVPKMLQDKQQSRSSTIAALNSVNAISALTQQVEGGAAELAGHLSGLAESVKPK 933
                                                                  :.|.|.|:|..
plant   212 ------------------------------------------------------IFGKAGSIKSV 222

  Fly   934 STSTPDKRNAASAGNGAGSAAALVAEPEGIWKEVKRRSKTNAIKENATTPPQQQQPPLSQTLNNN 998
            |...|   ||.......|.            ||...|::.:|..|..|....::   .:.||||.
plant   223 SICDP---NAVEESEKGGK------------KENFIRTRLHAFVEYETVEAAEK---AAATLNNE 269

  Fly   999 ND---NVKTNNTSSKSKSSSNNAPSNASSSATVCVTTNNASSATKATTKTTTTSTATTTTNNNIK 1060
            .|   .::.......:...:...|                  |.:...|...|:
plant   270 QDWRNGLRVKLLEQAAGKFAQRRP------------------ARREVDKEKDTT----------- 305

  Fly  1061 SGNAAYSKTHSKSSSKTAAPPSAQCHAEKEELDFQFDEELMDPLPPGTGRINNFTENFSDDDESD 1125
              ...:.:|..:.:.||....:.:.|                           .::|.:|||..:
plant   306 --GRVHDQTGGEKNKKTREHQNHRLH---------------------------HSDNPADDDGGN 341

  Fly  1126 YEFADRDINKLLIVAQVGRAPKHEGYDRTADFTSRTKITQDLENIINDGLVNYEEDLWTTTNVVA 1190
            :: .|::.||..:|.| ||...|:|                 .|.|..|.        .:::...
plant   342 HQ-KDKNGNKGRVVGQ-GRRQNHQG-----------------GNGIGHGT--------ASSSSHP 379

  Fly  1191 DYKTVNVISQADFEKLAG-------GRNKSVLPP 1217
            :|..|.|..:....::..       ||.|::.||
plant   380 NYHPVEVSKRPPGPRMPDGTRGFTMGRGKAIPPP 413

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
larp	NP_001247347.1	LARP_1_2	730..803	CDD:153403	32/75 (43%)
		DM15	1341..1382	CDD:128927
		DM15	1383..1421	CDD:128927
LARP6a	NP_851141.1	LA	101..180	CDD:128955	32/79 (41%)
		RRM_La_like_plant	193..282	CDD:240734	25/184 (14%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100			O	PTHR22792
Phylome	0	0.000	Not matched by this tool.
	1	1.100