DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment larp and LARP6c

DIOPT Version :9

Sequence 1:	NP_001247347.1	Gene:	larp / 53567	FlyBaseID:	FBgn0261618	Length:	1673	Species:	Drosophila melanogaster
Sequence 2:	NP_001325674.1	Gene:	LARP6c / 821444	AraportID:	AT3G19090	Length:	482	Species:	Arabidopsis thaliana

Alignment Length:	209	Identity:	59/209 - (28%)
Similarity:	86/209 - (41%)	Gaps:	55/209 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly   631 GAAGG-AGAAGTGVGSATRGPRRYRTPYRGGRQGRGGFSRQGPGRPTYRIPRHLLASGEYANYLP 694
            |..|| .|..|||||:.:..     ..|.||            |.||        |..::.:
plant    75 GCGGGVCGGGGTGVGTQSSD-----WIYVGG------------GDPT--------AQHQHVH--- 111

  Fly   695 ADAAGADSQSSYVLMGTHYFGNVPAAYIELDANS-----------IKEAIKKQVEYYFSVDNLTG 748
             |.|.|           .|..| ||.......||           ::..|.|||||.|:..:|..
plant   112 -DPAAA-----------FYISN-PAVQFPASQNSSSSSKNLLSDDLRLKIVKQVEYQFTDMSLLA 163

  Fly   749 DFFLRRKM--DPEGYIPVTLIASFHRVLALTTDVAVIVNAIKESDKLELFEGYKVRTKTTPTTWP 811
            :..:.:.:  |||||:||:.|||..::.|||::..::..|::.|.||.:.|..|...:|:..|..
plant   164 NESISKHISKDPEGYVPVSYIASTKKIKALTSNHHLVSLALRSSSKLVVSEDGKKVKRTSQFTDR 228

  Fly   812 ITEVPEVNEGEPKA 825
            ..|..:||....||
plant   229 DREELQVNLNITKA 242

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
larp	NP_001247347.1	LARP_1_2	730..803	CDD:153403	27/74 (36%)
		DM15	1341..1382	CDD:128927
		DM15	1383..1421	CDD:128927
LARP6c	NP_001325674.1	None
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5193
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810