Protein Alignment: larp and ssb

• Sequence 1: NP_001247347.1
• Gene: larp
• FlyBaseID: FBgn0261618
• Length: 1673
• Species: Drosophila melanogaster
• Sequence 2: NP_001001455.1
• Gene: ssb
• XenbaseID: XB-GENE-491374
• Length: 426
• Species: Xenopus tropicalis
• Alignment Length: 356
• Identity: 77/357 (22%)
• Similarity: 133/357 (37%)
• Gaps: 107/357 (30%)

  Fly   722 IELDANSIKEAIKKQVEYYFSVDNLTGDFFLRRK--MDPEGYIPVTLIASFHRVLALTTDVAVIV 784
            ::||..     |.:||||||...||..|.||.::  :| :|::|:..:..|:|:..||.|...|:
 Frog    11 LDLDTK-----ICEQVEYYFGDHNLPRDKFLNQQILLD-DGWVPLETMIKFNRLSKLTKDFNTIL 69

  Fly   785 NAIKESDKLELFE----GYKVRTKTTPTTWPITEVPEVNE--------------GEP-------- 823
            .|:|:| |.||.|    ..|:|..      |...:||:|:              |.|
 Frog    70 QALKQS-KTELLEIDEDKCKIRRS------PAKPLPELNDEYKNSLKNKSVYIKGFPTSANLDDI 127

  Fly   824 ----KAIGTLEQEQLE-----------------QNDGQEKLEEQTEA--DSPPPILTSA--MATK 863
                |..|.:|..|:.                 :::.::.||::...  ||...||:..  .|.|
 Frog   128 KEWLKDKGPIENIQMRRTLQKEFKGSIFLIFNTEDEAKKFLEDRNRKYNDSDMIILSKEEYFAKK 192

  Fly   864 PLNSIPPPPMPRNPQNLVPKMLQDKQQSRSSTIAALNSVNAISALTQQVEGGAAELAGHLSGLAE 928
                        |.:..:.|..:..:..:.:..|...:.:|...|.::..|...:.:|.|..:
 Frog   193 ------------NQERKLNKSEEKAKSKQENEEAQKQAEDAERKLMEERVGRLLKFSGDLDNM-- 243

  Fly   929 SVKPKSTSTPDKRNAASAGNGAGSAAALVAEPEGIWKEVKRRSKTNAI--KENATTPPQQQQPPL 991
                  ||..|            .:|...|..:..|.:..|.:|...:  |.||       :..|
 Frog   244 ------TSRED------------LSALFQAHGDIEWIDFSRGAKEGIVLFKMNA-------KKAL 283

  Fly   992 SQTLNNNNDNVKTNNTSSKSKSSSNNAPSNA 1022
            .:.:..|||::|....:.|.:....:|...|
 Frog   284 DKAMAANNDDLKLKGKAVKWELIEGDAEKEA 314

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
larp	NP_001247347.1	LARP_1_2	730..803	CDD:153403	30/79 (38%)
		DM15	1341..1382	CDD:128927
		DM15	1383..1421	CDD:128927
ssb	NP_001001455.1	LARP_3	12..91	CDD:153397	32/86 (37%)
		RRM1_La	112..183	CDD:240737	11/71 (15%)
		RRM_SF	231..332	CDD:327398	22/112 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	1	0.900				E1_COG5193
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900