Sequence 1: | NP_001247347.1 | Gene: | larp | FlyBaseID: | FBgn0261618 | Length: | 1673 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_291029.2 | Gene: | LARP1 | HGNCID: | 29531 | Length: | 1096 | Species: | Homo sapiens |
Alignment Length: | 1455 | Identity: | 446/1456 (31%) |
---|---|---|---|
Similarity: | 587/1456 (40%) | Gaps: | 506/1456 (35%) |
Fly 146 GGRGDGQKPQQAGGRRVPGSSDTERKSVRPRAPRGGSPRKSAAGAAGAAGSNAGAVSSAVPGGPK 210
Fly 211 VHKDRKDTSPSASIEGAGSSGNEAKS------------ADGDQQAGEK----GAAGAAPPPKR-F 258
Fly 259 IAAPPPKVNAWKISAKQSGSPKAGTSPLDKRVLQPKAQQQQQQTKQTASQNNNAQNTASNKKTQQ 323
Fly 324 QQQPQQGATTTTQTTTAAAAAATAAAAATAATTSAAAATSSAAAVPAATTETATTTTVDASQADA 388
Fly 389 LAKVVVKDKKKVNQKASDFSNVGDWPTLIGGTSGSGKATSNEPKRNPTKKQQSAKTAAAVAASSN 453
Fly 454 TTSSEVATESNVAGTTSSSNSNPSSSTTTTNTTTNSQATTAPVASTSHDAKAQRDAEPAANSAAG 518
Fly 519 TTGTAAGPALTKKIPKHKWRPLPIDLAKSSRPKPIGGRPNRRFSDDIADQRRPPRVYHDRQPGAG 583
Fly 584 GAGVESRHPHAGRHPY-GSRPAT--ATSERVDSWRSSSSTTTAAFDEQRSGAAGGAGAAGTGVGS 645
Fly 646 ATRGPRRYRTPYRGGRQGRGGFSRQGPGRPTYRIPRHLLASGEYA-NYLPADAAGADSQSSYVLM 709
Fly 710 GTHYFGNVPAAYI-ELDANSIKEAIKKQVEYYFSVDNLTGDFFLRRKMDPEGYIPVTLIASFHRV 773
Fly 774 LALTTDVAVIVNAIKESDKLELFEGYKVRTKTTPTTWPITEVPEVNEGEPKAIGTLEQEQLEQND 838
Fly 839 GQEKLEEQTEADSPPPILTSAMA--TKPLNSIPPPPMPRNPQNLVPKMLQDKQQSRSSTIAALNS 901
Fly 902 VNAISALTQQVEGGAAELAGHLSGLAESVKPKSTSTPDKRNAASAGNGAGSAAALVAEPEGIWKE 966
Fly 967 VKRRSKTNAIKENATTPPQQQQPPLSQTLNNNNDNVKTNNTSSKSKSSSNNAPSNASSSATVCVT 1031
Fly 1032 TNNASSATKATTKTTTTSTATTTTNNNIKSGNAAYSKTHSKSSSKTAAP---PSAQCHA----EK 1089
Fly 1090 EELDFQFDEEL--MDPLPPGTGRINNFTENFSDDDESDYEFADRDINKLLIVAQVGR-APKHEGY 1151
Fly 1152 DRTADFTSRTKITQDLENIINDGLVNYEEDLWT---------TTNVVADYKTVNVISQADFEKLA 1207
Fly 1208 GGRNKSVLPPQVVPP-PPPFEEDLDETLVG-------DTTLNSTLNNTL---------------- 1248
Fly 1249 ------KSRRARFY-AAPNSHSIDPRTPRKRKLRHTANPPVEAHVGWLLDTVEHRPRTTSMGS-- 1304
Fly 1305 SAGTSPTASSYGSFGSSVPQSLPVFQHPSHALLKENNFTQQAYHKYHSRCLKERRRLGYGQSQEM 1369
Fly 1370 NTLYRFWSFFLRENFNKSMYNEFRSLALEDAGNGFRYGLECLFRFFSYGLEKKFRPNIYQDFQDE 1434
Fly 1435 TIADYETGQLYGLEKFWAFLKYYKNGEKLEVQPKLAEYLKSFKNIEDFRVVEPEINEMLQGVGSL 1499
Fly 1500 NPGRQLNRHRSVSESDGTAVIAAGG 1524 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
larp | NP_001247347.1 | LARP_1_2 | 730..803 | CDD:153403 | 46/73 (63%) |
DM15 | 1341..1382 | CDD:128927 | 32/41 (78%) | ||
DM15 | 1383..1421 | CDD:128927 | 28/38 (74%) | ||
LARP1 | NP_291029.2 | Required for interaction with PABPC1. {ECO:0000269|PubMed:29244122} | 77..573 | 182/779 (23%) | |
LARP_1 | 404..476 | CDD:153406 | 46/73 (63%) | ||
Required for interaction with RPTOR and for repression of mRNAs with a 5'TOP motif. {ECO:0000269|PubMed:29244122} | 574..1096 | 244/586 (42%) | |||
Interaction with mRNA. {ECO:0000269|PubMed:20430826, ECO:0000269|PubMed:26206669} | 873..1023 | 108/151 (72%) | |||
DM15 | 885..925 | CDD:128927 | 32/40 (80%) | ||
DM15 | 926..964 | CDD:128927 | 28/38 (74%) | ||
Interaction with 7-methylguanosine mRNA cap structure. {ECO:0000244|PDB:5V87, ECO:0000269|PubMed:28379136} | 956..999 | 33/43 (77%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | E1_COG5193 | |||
Hieranoid | 1 | 1.000 | ||||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 551 | 1.000 | Inparanoid score | I1118 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | D258488at2759 | |||
OrthoFinder | 1 | 1.000 | FOG0001428 | |||
OrthoInspector | 1 | 1.000 | T609611 | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | O | PTHR22792 | ||
Phylome | 1 | 0.910 | 0.800 | Consistency score | ||
RoundUp | 1 | 1.030 | avgDist | Average_Evolutionary_Distance | R1945 | |
TreeFam | 1 | 0.960 | ||||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.960 |