Protein Alignment: larp and Larp1b

• Sequence 1: NP_001247347.1
• Gene: larp
• FlyBaseID: FBgn0261618
• Length: 1673
• Species: Drosophila melanogaster
• Sequence 2: XP_017175009.1
• Gene: Larp1b
• MGIID: 1914604
• Length: 746
• Species: Mus musculus
• Alignment Length: 932
• Identity: 219/933 (23%)
• Similarity: 311/933 (33%)
• Gaps: 363/933 (39%)

  Fly    87 GSVSLAQTGEKRAAAS---GGDNTAENSSELDDNN--DFVPVLSHHRRDRKKARKEKPRDQQPAG 146
            ||.:...:||.|..|:   ||...|..|:..:|.:  ...|      |....|.:::.....|.|
Mouse    40 GSGAPGASGELRPCAATRPGGGRLALRSAGGEDGHAGRCTP------RRAGSASQDRSGSVPPCG 98

  Fly   147 GRGD---------------GQKPQQAGGRRVP------------GSSD-----TERKSVRPRAP- 178
            .||.               ||.|..:....||            |..|     |.|::.:| ||
Mouse    99 ERGGRAPWTRTAPGWAGGWGQGPAMSARAPVPAAATREDPPAVAGDRDALLAATSRRAEQP-APG 162

  Fly   179 -RGG----SPRKSAAGAAGAAGSNAGAV-------SSAVPGGP-KVHKDRKDTSPSASIEGAGSS 230
             |.|    ..|.:||.:|||.|..:.|:       .:|||..| .:|...|..:|      .|..
Mouse   163 EREGKEAREERAAAATSAGARGEPSPALVLGHSVPQAAVPVRPLALHLAHKARAP------GGPF 221

  Fly   231 GNEA--------------------KSADGDQQAGEKGAAGA---APPPKRFIAAPPPKVNAWKIS 272
            |.||                    ...|..:.|.|..||..   .|||      ||||.|.|
Mouse   222 GGEAPPLPPPPPPPPPPPPPLPPPAPRDPPEDAREDPAAAGPEDKPPP------PPPKGNPW--- 277

  Fly   273 AKQSGSPKAGTSPLDKRVLQPKAQQQQQQTKQTASQNNNAQNTASNKKTQQQQQPQQGATTTTQT 337
                                         ||:.                     ||..:|..|
Mouse   278 -----------------------------TKKL---------------------PQHLSTVGT-- 290

  Fly   338 TTAAAAAATAAAAATAATTSAAAATSSAAAVPAATTETATTTTVDASQADALAKVVVKDKKKVNQ 402
                       ...:.|..|..|..||...:.|.                       |.|.|.:.
Mouse   291 -----------GVPSPAQDSPEAELSSPKIIKAG-----------------------KLKTKKSN 321

  Fly   403 KASDFSNVGDWPT---LIGGTSGSGKATSNEPKRNPTKKQQSAKTAAAVAASSNTTSSEVATESN 464
            ||||||::.:|||   |:  .:||....:...|:...:|::..|    :...||:.|.| ..|:.
Mouse   322 KASDFSDMANWPTPGELV--NTGSQSVINQGNKKPQIRKEKEEK----IEKRSNSESKE-NREAK 379

  Fly   465 VAGTTSSSNSNPSSSTTTTNTTTNSQATTAPVASTSHDAKAQRDAEPAANSAAGTTGTAAGPALT 529
            :.|.|.:.:.:.:.|:                        :||
Mouse   380 LDGPTENISEDEAQSS------------------------SQR---------------------- 398

  Fly   530 KKIPKHKWRPLPIDLAKSSRPKPIGGRPNRRFSDDIADQRRPPRVYHDRQPGAGGAGVESR-HPH 593
            |:..||||.||.:|          ..||:        .|.||            |:...|| .|.
Mouse   399 KRANKHKWVPLHLD----------DVRPD--------SQERP------------GSRNSSRCQPE 433

  Fly   594 AGRHPYGSRPATATSERVDSWRSSSSTTTAAFDEQRSGAAGGAGAAGTGVGSATRGPRRYRTPYR 658
            |.:..:.:|.:...     |||.......   |:....:....|  ||..|| |||        |
Mouse   434 ANKPTHSNRKSDTR-----SWRREREKRD---DQDEVSSVRSEG--GTIRGS-TRG--------R 479

  Fly   659 GGRQGRGGFSRQGPGRPT--------YRIPRHLLASGEYANYLPADAAGADSQSSYVLMGTHYFG 715
            |..:|||  ..:|.|.|.        ||.|      ||...    .....:..:|   |..:|..
Mouse   480 GRGRGRG--RGRGRGNPRLNFDYSYGYREP------GERTE----QPFSTELNTS---MMYYYDD 529

  Fly   716 NVPAAYIELDANSIKEAIKKQVEYYFSVDNLTGDFFLRRKMDPEGYIPVTLIASFHRVLALTTDV 780
            ........::...:||.||:|:|||||.:||..|||||||||.:|::|::|||.||||.||||::
Mouse   530 GTGVRVYPVEETLLKEYIKRQIEYYFSTENLERDFFLRRKMDEQGFLPISLIAGFHRVQALTTNL 594

  Fly   781 AVIVNAIKESDKLELFEGYKVRTKTTPTTWPI----------------TEVPEVNEGEPKAIG-- 827
            .:|:.|:|:|.::|:.: .|:|.|..|..|||                .:.||...|:  |.|
Mouse   595 NLILEALKDSTEVEIVD-EKMRKKIEPEKWPIPGPPPRNVPQTDFSQLIDCPEFIPGQ--AFGSH 656

  Fly   828 ---TLEQE----------------------------QLEQNDGQEKLEEQTEADSPPPILTSAMA 861
               |.|::                            |:.||....||........|..:|.:...
Mouse   657 TESTKEEDESRHKPPSRVSRWVGDGVQGPWAKTTLCQVYQNYSAGKLNIHEHTTEPRSLLYTIFK 721

  Fly   862 TKPLNSIPPPPMPRNPQNLVPK 883
            .|.|......|..:|...:|||
Mouse   722 KKTLKVKTSKPDLKNSNYIVPK 743

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
larp	NP_001247347.1	LARP_1_2	730..803	CDD:153403	41/73 (56%)
		DM15	1341..1382	CDD:128927
		DM15	1383..1421	CDD:128927
Larp1b	XP_017175009.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930				C121184538
eggNOG	1	0.900				E1_COG5193
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000				FOG0001428
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100			LDO	PTHR22792
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030		avgDist	Average_Evolutionary_Distance	R1945
TreeFam	0	0.000	Not matched by this tool.
	5	4.960