DRSC/TRiP Functional Genomics Resources

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Protein Alignment: lectin-29Ca and Colec11

Sequence 1:NP_652640.1 Gene:lectin-29Ca FlyBaseID:FBgn0040098 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001300907.1 Gene:Colec11 MGIID:1918943 Length:278 Species:Mus musculus

Alignment Length:177 Identity:37/178 (21%)
Similarity:71/178 (40%) Gaps:35/178 (20%)


  Fly    69 IGNMEQRLEMRLQSFQNQMETKLRALKQQIEPYMENVKMSNKIKMSVFKKIGSRHFYLEKQKKMP 133
            ||.|:.::        .|:.|:|:.:|.         .:.:...::..::..|:.:.|.|::|. 
Mouse   123 IGEMDNQV--------TQLTTELKFIKN---------ALPSPAAVAGVRETESKIYLLVKEEKR- 169

  Fly   134 WDSAYDTCRQMGGHLANILDEKE---LNEIFSEETKKKYWVDINSRANDGASWISTLSGRDVPFL 195
            :..|..:|:..||.|:...||..   :....::....:.::.||....:||...|..|.... |.
Mouse   170 YADAQLSCQARGGTLSMPKDEAANGLMASYLAQAGLARVFIGINDLEKEGAFVYSDRSPMQT-FN 233

  Fly   196 KWKPNLATNIHNH--CVYINSNEMYFENCAND------NYFACQAEQ 234
            ||:.....|.::.  ||     ||......||      .||.|:.::
Mouse   234 KWRSGEPNNAYDEEDCV-----EMVASGGWNDVACHITMYFMCEFDK 275

Known Domains:


GeneSequenceDomainRegion External IDIdentity
lectin-29CaNP_652640.1 CLECT 131..231 CDD:153057 27/111 (24%)
Colec11NP_001300907.1 Collagen 41..96 CDD:189968
CLECT_collectin_like 158..273 CDD:153061 30/122 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 0.750 Consistency score
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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