DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment lectin-29Ca and Colec10

DIOPT Version :9

Sequence 1:	NP_652640.1	Gene:	lectin-29Ca / 53547	FlyBaseID:	FBgn0040098	Length:	236	Species:	Drosophila melanogaster
Sequence 2:	NP_001124013.1	Gene:	Colec10 / 299928	RGDID:	1307149	Length:	277	Species:	Rattus norvegicus

Alignment Length:	175	Identity:	34/175 - (19%)
Similarity:	75/175 - (42%)	Gaps:	26/175 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly    64 GTLWRIGNMEQRLEMRLQSFQNQMETKLRALKQQIEPYMENVKMSNKIKMSVFKKIGSRHFYLEK 128
            ||:...|        |.:....|::..:..||..:: :::||       ::..::...:.:|:.:
  Rat   116 GTICDCG--------RYRKVVGQLDISVARLKTSMK-FIKNV-------IAGIRETEEKFYYIVQ 164

  Fly   129 QKKMPWDSAYDTCRQMGGHLANILDEKELNEIFSEETKK----KYWVDINSRANDGASWISTLSG 189
            ::| .:..:...||..||.||...|| .:|.:.::...|    :.::.:|....:| .::.|.:.
  Rat   165 EEK-NYRESLTHCRIRGGMLAMPKDE-VVNTLIADYVAKSGFFRVFIGVNDLEKEG-QYVFTDNT 226

  Fly   190 RDVPFLKWKPNLATNIHNH--CV-YINSNEMYFENCANDNYFACQ 231
            ....:..||....::.:.|  || .::|.......|....||.|:
  Rat   227 PLQNYSNWKEGEPSDPYGHEDCVEMLSSGRWNDTECHLTMYFVCE 271

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
lectin-29Ca	NP_652640.1	CLECT	131..231	CDD:153057	23/106 (22%)
Colec10	NP_001124013.1	Collagen	45..94	CDD:189968
Colec10	NP_001124013.1	CLECT_collectin_like	157..272	CDD:153061	25/118 (21%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100086
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.810