DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-29Ca and Clec4m

DIOPT Version :10

Sequence 1:NP_652640.1 Gene:lectin-29Ca / 53547 FlyBaseID:FBgn0040098 Length:236 Species:Drosophila melanogaster
Sequence 2:XP_038945074.1 Gene:Clec4m / 288378 RGDID:1561466 Length:336 Species:Rattus norvegicus


Alignment Length:235 Identity:51/235 - (21%)
Similarity:97/235 - (41%) Gaps:41/235 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IFSIFALWNF-WGVSAKKQDTSTGTNELPKAPM---PYYTIENIDMHQQHWFTYNSLRQNGTLWR 68
            :|.:|...|. |....|::......|:|....|   |....:|..|.::.......|:.. .|.|
  Rat    81 LFQVFKTTNTQWQEEPKQEKILEELNQLTDELMSRIPISQGQNESMQEKISEQLTQLKVE-LLSR 144

  Fly    69 I-------GNMEQRLEMRLQSFQNQMETKLRALKQQIEPYMENV-KMSNKIKMSVFK-------- 117
            |       .:|::::..:|...:.::.:|:.:|:.|.|...|.: :...::|..:.:        
  Rat   145 IPVFQVQNESMQEKISEQLTQLKAELLSKIPSLQVQDESKQEKIYQQLVQMKTELLRLCRLCPWD 209

  Fly   118 ---KIGSRHFYLEKQKKMPWDSAYDTCRQMGGHLANILDEKELNEIFSEETKK---KYWVDINSR 176
               .:|:.:|..:.|:.  |:.|...|::....|..|..::|  :.|.:.|.|   ..|:.::..
  Rat   210 WTFLLGNCYFLSKSQRN--WNDAVRACKEEKAQLVIINSDEE--QTFLQLTSKAKGPTWMGLSDL 270

  Fly   177 ANDGASWI----STLSGRDVPFLK-WKPNLATNI-HNHCV 210
            .|: |:|:    ||||.|   |.| |......|| ...||
  Rat   271 KNE-ATWLWVDGSTLSSR---FQKYWNRGEPNNIGEEDCV 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-29CaNP_652640.1 CLECT 131..231 CDD:153057 25/89 (28%)
Clec4mXP_038945074.1 CLECT_DC-SIGN_like 206..328 CDD:153060 28/109 (26%)

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