DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-29Ca and Mbl1

DIOPT Version :10

Sequence 1:NP_652640.1 Gene:lectin-29Ca / 53547 FlyBaseID:FBgn0040098 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_036731.2 Gene:Mbl1 / 24548 RGDID:3055 Length:238 Species:Rattus norvegicus


Alignment Length:165 Identity:41/165 - (24%)
Similarity:74/165 - (44%) Gaps:27/165 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 LEMRLQSFQNQMETKLRALKQQIEPYMENVKMSNKI-KMSVFKKIGSRHFYLEKQKKMPWDSAYD 139
            :|::|.:    ||.::..||.::|       ::||: ..|:.||.|.: |::...::||:.....
  Rat    91 IEVKLAN----MEAEINTLKSKLE-------LTNKLHAFSMGKKSGKK-FFVTNHERMPFSKVKA 143

  Fly   140 TCRQMGGHLANILDEKELNEIFSEETKKKYWVDINSRANDGASWISTLSGRDVPFLKWKPNLATN 204
            .|.::.|.:| |....|.|:...|..|...::.|.....:| .::....|| :.:..||.: ..|
  Rat   144 LCSELRGTVA-IPRNAEENKAIQEVAKTSAFLGITDEVTEG-QFMYVTGGR-LTYSNWKKD-EPN 204

  Fly   205 IH---NHCVYINSNEMYFENCANDNYFACQAEQWA 236
            .|   ..||.|..|.::       |..:|||...|
  Rat   205 DHGSGEDCVTIVDNGLW-------NDISCQASHTA 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-29CaNP_652640.1 CLECT 131..231 CDD:153057 23/102 (23%)
Mbl1NP_036731.2 Collagen <36..86 CDD:460189
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 38..87
CLECT_collectin_like 126..236 CDD:153061 28/119 (24%)
Calcium-dependent carbohydrate binding. /evidence=ECO:0000269|PubMed:11850428, ECO:0000269|PubMed:1436090, ECO:0000269|PubMed:9033386 202..210 2/7 (29%)
Blue background indicates that the domain is not in the aligned region.

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