DRSC/TRiP Functional Genomics Resources

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Protein Alignment: lectin-29Ca and clec-50

Sequence 1:NP_652640.1 Gene:lectin-29Ca FlyBaseID:FBgn0040098 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_507830.1 Gene:clec-50 WormBaseID:WBGene00012253 Length:321 Species:Caenorhabditis elegans

Alignment Length:116 Identity:28/117 (24%)
Similarity:45/117 (38%) Gaps:21/117 (18%)


  Fly   134 WDSAYDTCRQMGGHLANILDEKELNEIFSE---------ETKKKYWVDINSRANDGASWISTLSG 189
            |:.|...|..:|.||.::..|.| |...:.         ..|...|:.::....|   |:.| .|
 Worm   204 WEDAEAACVLLGAHLTSVHSETE-NTFVANLASCGIKEGNPKDLAWIGMHKVGQD---WVWT-DG 263

  Fly   190 RDVPFLKWKPNLATNI-HNHCVYIN---SNEMYFENCANDNYFACQAEQWA 236
            ....::.|.|....|. ..:||...   |::.::||..|:   ||..|..|
 Worm   264 TPSNYINWAPKQPDNPGKENCVETAPDLSHDKWYENWNNE---ACSTEMRA 311

Known Domains:


GeneSequenceDomainRegion External IDIdentity
lectin-29CaNP_652640.1 CLECT 131..231 CDD:153057 26/110 (24%)
clec-50NP_507830.1 CLECT 26..146 CDD:214480
CLECT 182..315 CDD:214480 28/117 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 0.714 Consistency score
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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