DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-29Ca and Asgr2

DIOPT Version :9

Sequence 1:NP_652640.1 Gene:lectin-29Ca / 53547 FlyBaseID:FBgn0040098 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001300854.1 Gene:Asgr2 / 11890 MGIID:88082 Length:301 Species:Mus musculus


Alignment Length:203 Identity:39/203 - (19%)
Similarity:75/203 - (36%) Gaps:32/203 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 FTYNSLRQNGTLWRIGNMEQRLEMRLQSFQNQMETKLRALKQQIEPYMENVK------MSNKIKM 113
            |:.::|.:.|.|..:|.....:   |.|:..|:|.|.:.||......:.::|      .:...::
Mouse    98 FSSSTLMEFGALDTLGGSTNAI---LTSWLAQLEEKQQQLKADHSTLLFHLKHFPMDLRTLTCQL 159

  Fly   114 SVFKKIGSR-----------HFYLEKQKKMPWDSAYDTCRQMGGHLANILDEKELNEIFSEETKK 167
            :.|:..|:.           ..|...:..:.|..|...|:....||..|...:|.:.:....::.
Mouse   160 AYFQSNGTECCPVNWVEFGGSCYWFSRDGLTWAEADQYCQLENAHLLVINSREEQDFVVKHRSQF 224

  Fly   168 KYWVDINSRANDGA-SWISTLSGRDVPFLKWKPNLATNIHNH-------CVYINSNEMYFEN-CA 223
            ..|:.:..|  ||: .|:.....|. .:..|......|...|       |..|.|:..:.:| |.
Mouse   225 HIWIGLTDR--DGSWKWVDGTDYRS-NYRNWAFTQPDNWQGHEQGGGEDCAEILSDGHWNDNFCQ 286

  Fly   224 NDNYFACQ 231
            ..|.:.|:
Mouse   287 QVNRWVCE 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-29CaNP_652640.1 CLECT 131..231 CDD:153057 22/108 (20%)
Asgr2NP_001300854.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43
Lectin_N 29..162 CDD:281887 13/66 (20%)
CLECT_DC-SIGN_like 170..295 CDD:153060 24/128 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.