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Protein Alignment CG3021 and Trmu

DIOPT Version :9

Sequence 1:	NP_652639.1	Gene:	CG3021 / 53546	FlyBaseID:	FBgn0040337	Length:	389	Species:	Drosophila melanogaster
Sequence 2:	NP_082339.1	Gene:	Trmu / 72026	MGIID:	1919276	Length:	417	Species:	Mus musculus

Alignment Length:	404	Identity:	169/404 - (41%)
Similarity:	244/404 - (60%)	Gaps:	19/404 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 IRNVVVGVSGGVDSAVSAHLLAEQGFKVLGVFMRNWDEADEVGRCSGEADLKDAEWACRQLGVEL 66
            :|:||..:||||||||:|.||..:|::|.||||:|||..||.|.|:.:.|.:||...|:.|.:..
Mouse     4 LRHVVCALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEQGVCAADKDCEDAYKVCQILDIPF 68

  Fly    67 RQVNYVREYWTAVFSQFLDDYQMGLTPNPDILCNRHIKFDLFHKHALENLGYDAVATGHYARNSL 131
            .||:||:|||..|||.||::|:.|.||||||.||:||||..|:.:|::|||.||||||||||.||
Mouse    69 HQVSYVKEYWNDVFSDFLNEYEKGRTPNPDINCNKHIKFSCFYHYAVDNLGADAVATGHYARTSL 133

  Fly   132 ---------------GNYLEGIASNNDARLLIPADTFKDQTFFLAGISRKALQRTMFPLGDFQKS 181
                           |.:.......|..:||..||:||||||||:.:|:.||:||:||||:..|.
Mouse   134 EDEEVFEQKHTKKPDGLFRNRFEVRNPVKLLQAADSFKDQTFFLSQVSQDALRRTIFPLGELTKD 198

  Fly   182 QVKDLAKKIGFQRLAKKKESTGICFVGKRNFKDFIQEYITSKRGPFLDIDSGAVVGHHEGIHQWT 246
            .||.:|.:.....:.:|:||.||||:||||.:.|:.:|:..:.|.|:.|:...|:|.|:|...:|
Mouse   199 FVKKIAAENSLHHVLQKRESMGICFIGKRNLEHFLLQYLQPRPGKFVSIEDNTVLGTHKGWFLYT 263

  Fly   247 VGQRCRLSSFLQPYFVARKEAASNTIYVASGHNHPALLSTHIAVDPPNWLCSKSQQILSDTGSLR 311
            :|||.::|...:|::|..|:.....:.||...:||||....:..:..:|:..:....|.....:.
Mouse   264 LGQRAKISGLREPWYVVEKDGTKGDVLVAPRVDHPALYRDLLRTNRVHWIAEEPPAALVRDKMME 328

  Fly   312 CRFRFQHTKPLVDCQLSISPSNTFLVELDAPLRAITPGQYAVFYDDTACLGSARIL----SANPL 372
            |.|||:|...||.|.|:::...|..|.....:|.:..||:||||....||||.:||    ||..|
Mouse   329 CHFRFRHQMALVPCVLTLNQDGTVWVTAVKAVRGLALGQFAVFYKGEECLGSGKILRLGPSAYTL 393

  Fly   373 KKKNAQTQQAQAAN 386
            :|...:|:.|..|:
Mouse   394 QKGKNRTRVAPEAS 407

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.