DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF2 and CP31B

DIOPT Version :10

Sequence 1:NP_652611.1 Gene:SF2 / 53443 FlyBaseID:FBgn0283477 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_199836.1 Gene:CP31B / 835090 AraportID:AT5G50250 Length:289 Species:Arabidopsis thaliana


Alignment Length:199 Identity:52/199 - (26%)
Similarity:78/199 - (39%) Gaps:40/199 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVD-LKNR-----RGPPFAFVEFEDARDADDAVKAR 64
            |.:::|||||.|:.::.:..||.:.|.|...: :.||     ||  |.||......:|:.||:..
plant   112 EAKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRG--FGFVTMSTVEEAEKAVEKF 174

  Fly    65 DGYDYDGYRLRVE--FPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGS 127
            :.::.:|.||.|.  .|||..|                    .|.|....:.:|:.|..||....
plant   175 NSFEVNGRRLTVNRAAPRGSRP--------------------ERQPRVYDAAFRIYVGNLPWDVD 219

  Fly   128 WQDLKDHMREAGDVCFADTYKD-------GSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIR 185
            ...|:....|.|.|..|....|       |.|.|:.....::..||..||....   ||....:.
plant   220 SGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAALDGQNL---EGRAIKVN 281

  Fly   186 VRED 189
            |.|:
plant   282 VAEE 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF2NP_652611.1 RRM_SF 3..80 CDD:473069 25/81 (31%)
RRM2_SRSF1_like 115..188 CDD:410013 20/79 (25%)
CP31BNP_199836.1 RRM_SF 114..193 CDD:473069 25/80 (31%)
RRM 208..289 CDD:440488 21/81 (26%)

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