Protein Alignment SF2 and srsf6b

DIOPT Version :10

• Sequence 1: NP_652611.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_001008732.1
• Gene: srsf6b / 494133
• ZFINID: ZDB-GENE-041219-1
• Length: 355
• Species: Danio rerio
• Alignment Length: 290
• Identity: 109/290 - (37%)
• Similarity: 139/290 - (47%)
• Gaps: 55/290 - (18%)

  Fly     8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDGY 72
            |:|:|.|...:|.||||..|..:||:...||||..|    ||||||.|||||||...:|.:..|.
Zfish     3 RVYIGKLSYHVREKDIQRFFGGYGKLMETDLKNGYG----FVEFEDTRDADDAVYELNGKELCGE 63

  Fly    73 RLRVEFPR---------GGGPGSYRGGNRN----DRSRDGGGRMGGRGPPAKRSQYRVMVTGLPA 124
            |:.||..|         |||.|.: ||..|    .|||.|..:.   |||. |::||::|..|.:
Zfish    64 RVIVEHARGPRRDRDGYGGGYGGF-GGRSNSGYSSRSRSGRDKY---GPPV-RTEYRLIVENLSS 123

  Fly   125 SGSWQDLKDHMREAGDVCFADTYKD--GSGVVEFLRHEDMKYAIKKLD----------------- 170
            ..|||||||.||:||:|.:||.:|:  ..||:||..|.||:.|:.|||
Zfish   124 RCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSHSDMRRALDKLDVTDINGRKIRLVEDKPR 188

  Fly   171 ------DSRFRSHEGEVAYIRVREDSGDNDRGGGGGGSGGGGGGSGGGGSRDYRDRSR------S 223
                  .||.||.....:..|.|..|....|......|......|..|  |.||.|||      |
Zfish   189 RRRSYSASRSRSRSRRRSRSRSRRSSRSQSRSRSRSRSRSKHSRSRSG--RKYRSRSRSSRKSHS 251

  Fly   224 RSFSSRPRRRGTPTYSPVRRQSYSRSRSRS 253
            :|.|.:.|.|........|.:|.|||:::|
Zfish   252 KSHSKKSRSRSRSRTEKSRSRSRSRSKAKS 281

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_652611.1	RRM_SF	3..80	CDD:473069	35/71 (49%)
		RRM2_SRSF1_like	115..188	CDD:410013	35/97 (36%)
srsf6b	NP_001008732.1	RRM1_SRSF6	1..72	CDD:410009	35/72 (49%)
		RRM2_SRSF6	114..186	CDD:410159	30/71 (42%)