DRSC/TRiP Functional Genomics Resources

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Protein Alignment RecQ4 and recql5

DIOPT Version :10

Sequence 1:NP_652607.1 Gene:RecQ4 / 53438 FlyBaseID:FBgn0040290 Length:1579 Species:Drosophila melanogaster
Sequence 2:XP_031749855.1 Gene:recql5 / 100216093 XenbaseID:XB-GENE-958080 Length:1071 Species:Xenopus tropicalis


Alignment Length:469 Identity:153/469 - (32%)
Similarity:226/469 - (48%) Gaps:92/469 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   824 GLDTTASSSNRSQHGGVKPLYDLLPDGSVQDTTPEVLEALHMFGHTNFRKG-QDRAIMRTLSGLS 887
            |.:..:|||:.|.....:|..      .:|.|...|      ||..:||.. |:.|....:.|.:
 Frog    16 GTNKMSSSSSSSSSSSSRPRC------RIQTTLKNV------FGFNSFRSDLQENATRAVVKGET 68

  Fly   888 SL-VTLSTGSGKSLCYQLPAYLYSRKVGAITLVISPLVSLMEDQVTGVPHF----LRAHCLHTNQ 947
            .: |.:.||:||||||||||.|   .|| ||:|||||::|::||   |.|.    ::|..|::..
 Frog    69 DVFVVMPTGAGKSLCYQLPAVL---SVG-ITVVISPLIALIQDQ---VDHLVALKIKACSLNSKL 126

  Fly   948 TAPQRMKIQQMIAN--GEIDILLVSPEAVVAGERATGFGAILRQL---PPIAFACIDEAHCVSQW 1007
            ..|:|.||.|.:.:  .:|.:|.::||...    :..|..||.||   ..:::..||||||||:|
 Frog   127 PLPERKKIIQDLESEAPQIKLLYITPEMAA----SASFQPILAQLLSRSLLSYLIIDEAHCVSEW 187

  Fly  1008 SHNFRPSYLMICKVLRKNLGVRTVLGLTATATLPTRVSIINHLGISDGERGIISDIPLP---DNL 1069
            .|:|||.||.:.. ||..:.....:.||||||...:..||..|.:    |..:|....|   .||
 Frog   188 GHDFRPDYLRLGS-LRSRIPHTPCVALTATATKQVQDDIIASLKL----RQPVSMFKTPCFRSNL 247

  Fly  1070 VLSVS-KDENRD------AALLQLLNSER----FEPCQSIIIYCTRRDECERIAGFIRTCVQDRR 1123
            ...|. ||...|      ...|:.|.::.    |..|.  |:||..||.||.:|           
 Frog   248 FYDVQLKDLVGDPYGDLKEFCLKALGTKTPQGGFPGCG--IVYCRTRDACEEVA----------- 299

  Fly  1124 EPTQDQTKKRKRVNWQAEPYHAGMPASRRRTVQKAFMSNELRIVVATIAFGMGINKPDIRAVIHY 1188
                .|..:|..:   ::|||||:.|..|.|:|..:|...:.::||||:||||::|.::|.|.|:
 Frog   300 ----VQLSQRGVL---SKPYHAGLKAGDRVTIQNDWMDGTVPVIVATISFGMGVDKANVRFVAHW 357

  Fly  1189 NMPRNFESYVQEIGRAGRDGLPSHCHLFLDAKGGDQSELRRHVYSNSIDRHVIRKLLQKIFVPCS 1253
            |:.::...|.||.|||||||..:.|.|:               ||.: ||..:..|::|......
 Frog   358 NIAKSLAGYYQESGRAGRDGKQAFCRLY---------------YSRT-DRDQVGFLIRKEIAQAQ 406

  Fly  1254 C---DKEASKRTAL 1264
            .   |.:||.:..:
 Frog   407 AKRGDNKASDKAGM 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RecQ4NP_652607.1 RecQL4_SLD2_NTD 9..55 CDD:412085
RecQ 855..>1216 CDD:440280 136/385 (35%)
recql5XP_031749855.1 RecQ 37..461 CDD:440280 147/442 (33%)
RecQ5 667..811 CDD:399738
Blue background indicates that the domain is not in the aligned region.

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