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Protein Alignment Vhl and vhl
DIOPT Version :9
Sequence 1: | NP_001260885.1 |
Gene: | Vhl / 53433 |
FlyBaseID: | FBgn0041174 |
Length: | 178 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001074153.1 |
Gene: | vhl / 791202 |
ZFINID: | ZDB-GENE-070112-1042 |
Length: | 175 |
Species: | Danio rerio |
Alignment Length: | 139 |
Identity: | 40/139 - (28%) |
Similarity: | 74/139 - (53%) |
Gaps: | 15/139 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 QNNRDGQQ---LVGADQGKVEVYVLFANTTYRTLDLYWVCERERENMYLTLKPFEEVRVNTFTTH 68
|::::||| ||.:...:::|.|||.|.:.|.:...|:........|:.::|:...|:.||..|
Zfish 3 QDSQEGQQPLPLVRSLISRIQVNVLFCNCSPRVVKPVWINFLGEPQPYVNIQPYTGRRITTFVGH 67
Fly 69 SWLFRDYYTGERMHVRSQRIFQPIRVRVPKSQQSPDQLVDVRSEVLIHFPMRSLRENCLWLVARW 133
.|:|||..|.:.|.|.::.:: :|.|.:: .|:.:.: |..|:.:||:.||.:|.|
Zfish 68 PWMFRDAETDDPMVVNNKEMY------LPASLEN-GQVANAK----ITLPVLTLRDRCLQVVRR- 120
Fly 134 LIRTSNAPR 142
|:|..:..|
Zfish 121 LVRREDVGR 129
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Vhl | NP_001260885.1 |
pVHL |
21..162 |
CDD:176472 |
34/122 (28%) |
vhl | NP_001074153.1 |
VHL |
13..157 |
CDD:280091 |
36/129 (28%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170595948 |
Domainoid |
1 |
1.000 |
49 |
1.000 |
Domainoid score |
I11875 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4710 |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
58 |
1.000 |
Inparanoid score |
I5418 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1509532at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0005700 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm25691 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_107013 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR15160 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R9301 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
13 | 12.790 |
|
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