DRSC/TRiP Functional Genomics Resources

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Protein Alignment: wds and CG9945

Sequence 1:NP_001245503.1 Gene:wds FlyBaseID:FBgn0040066 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_611494.1 Gene:CG9945 FlyBaseID:FBgn0034527 Length:511 Species:Drosophila melanogaster

Alignment Length:410 Identity:84/411 (20%)
Similarity:167/411 (41%) Gaps:104/411 (25%)


  Fly    14 VVHPPQQPLPTAPSGPNSLQPNSVGQPGATTSSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSAV 78
            :||..||            :.|.:..|.:.:.|.:.....|:|.: ||......::..:| :...
  Fly    84 LVHALQQ------------RENGLASPHSASFSKNQQRYISNLYI-PNKKATRLMSLESK-IFVT 134

  Fly    79 KFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-SDSRLLVSGSD------DK 136
            ||:.:|..|.::..|..::|:....|.:...   :::...||.|| .|:....:|..      .:
  Fly   135 KFNRSGSKLLTACQDGFVRIYDGAKGTYHLL---NRIRARDVEWSIIDADFSPNGEHFAYSTWSR 196

  Fly   137 TLKVWELSTGK------SLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP 195
            :|.:..::.|:      .:..|..|...:|...::|..:.|:.||.:.:|.:.|:|| :..:.|.
  Fly   197 SLFIMPVNGGEDDCQWIDVNGLPSHRLAIFSLRYSPTGDKIIGGSNNSTVIVTDIRT-RNTQILR 260

  Fly   196 AHSDP---VSAVHF--NRDGSLIVSSSYDGLCRIWD---TASGQCLK-------------TLIDD 239
            .|..|   |::|.|  ::|.::|::...|||.:::|   |...:.|.             |.||.
  Fly   261 THRMPGKDVNSVCFLHDKDPNVIIAGCDDGLLKVYDLRTTFRSRDLSKSVASFIGHYDGITYIDS 325

  Fly   240 DNPPVSFVKFSPNGKYILAATLDNTLKLWD---------------------------------YS 271
            .|          :|.::|:.:.|.::|:||                                 |:
  Fly   326 RN----------DGYHVLSNSKDQSIKIWDIRQPSNMRNRSRSRQQVDPTTWDYRWNRVPREFYN 380

  Fly   272 KGKCLK------TYTGHKNEKYCIFANFS---VTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGH 327
            ..|.|:      ||.||:..|..:.|.||   .||.::|.:|.....:.|:::.:.::.:.::||
  Fly   381 PHKPLEGDSSIMTYRGHRVTKTLLRAKFSPMEQTGQRYIYTGCATGRIIIYDVLTGKIQEAIEGH 445

  Fly   328 TDTVLCTACHPTENIIASAA 347
            ...:.....||..:.|.|.:
  Fly   446 RTVIRDLDWHPDRSEIVSGS 465

Known Domains:


GeneSequenceDomainRegion External IDIdentity
wdsNP_001245503.1 WD40 <61..361 CDD:225201 74/364 (20%)
WD40 64..358 CDD:238121 73/361 (20%)
WD40 repeat 75..112 CDD:293791 7/37 (19%)
WD40 repeat 118..154 CDD:293791 9/49 (18%)
WD40 repeat 159..195 CDD:293791 10/36 (28%)
WD40 repeat 202..237 CDD:293791 11/53 (21%)
WD40 repeat 244..280 CDD:293791 11/75 (15%)
WD40 repeat 288..325 CDD:293791 8/40 (20%)
WD40 repeat 331..357 CDD:293791 4/18 (22%)
CG9945NP_611494.1 WD40 128..467 CDD:295369 73/354 (21%)
WD40 repeat 131..170 CDD:293791 7/42 (17%)
WD40 <133..478 CDD:225201 72/348 (21%)
WD40 repeat 178..220 CDD:293791 5/42 (12%)
WD40 repeat 225..260 CDD:293791 10/36 (28%)
WD40 repeat 270..314 CDD:293791 10/44 (23%)
WD40 repeat 323..395 CDD:293791 14/82 (17%)
WD40 repeat 403..443 CDD:293791 8/40 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG0266
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
10.900

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