DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CSAD and Gad1

DIOPT Version :9

Sequence 1:XP_024304779.1 Gene:CSAD / 51380 HGNCID:18966 Length:620 Species:Homo sapiens
Sequence 2:NP_001261396.1 Gene:Gad1 / 38484 FlyBaseID:FBgn0004516 Length:510 Species:Drosophila melanogaster


Alignment Length:520 Identity:218/520 - (41%)
Similarity:323/520 - (62%) Gaps:39/520 - (7%)


- Green bases have known domain annotations that are detailed below.


Human   105 SLAGDPVAVEALLRAVFGVVVDEAIQKGTSVSQKVCEWKEPEELKQLLDLELRSQGESQKQILER 169
            ::...|...|.||: |..|::| .::.....::||.::..||::|:||||::..:....:|::|.
  Fly    26 TVTAGPETREFLLK-VIDVLLD-FVKATNDRNEKVLDFHHPEDMKRLLDLDVPDRALPLQQLIED 88

Human   170 CRAVIRYSVKTGHPRFFNQLFSGLDPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRAL 234
            |...::|.||||||.|||||.:|||..::||..:|.:.||:.:||||||||:|||..||.|:|.:
  Fly    89 CATTLKYQVKTGHPHFFNQLSNGLDLISMAGEWLTATANTNMFTYEIAPVFILMENVVLTKMREI 153

Human   235 VGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLP-PLALFTSKEVGKRHRPNPGLLI 298
            :|||.||.|..|||||||:||...||::.:|:.|:.|...|| .|.:|||.:.....:....:..
  Fly   154 IGWSGGDSILAPGGSISNLYAFLAARHKMFPNYKEHGSVGLPGTLVMFTSDQCHYSIKSCAAVCG 218

Human   299 LISSH-VTTPSRRELRFWDLAPTVSEWSRLMREGKWSPRIWRGRLVWPRLRLTFHFFETFILDSG 362
            |.:.| :..||....:.     ..||..||:.|.|                           ..|
  Fly   219 LGTDHCIVVPSDEHGKM-----ITSELERLILERK---------------------------AKG 251

Human   363 AVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRH-LLDGIQRADSV 426
            .:||.|:||:|||||||||.:..|||:||::..|:|:||||||.:|:|:.||| ...|::|||||
  Fly   252 DIPFFVNATAGTTVLGAFDDINTIADICQKYNCWMHIDAAWGGGLLMSRKHRHPRFTGVERADSV 316

Human   427 AWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLK 491
            .||||||:.|.||||.:..:: ..||..|:...|.|||..||.||::.||||||:||||..|..|
  Fly   317 TWNPHKLMGALLQCSTIHFKE-DGLLISCNQMSAEYLFMTDKQYDISYDTGDKVIQCGRHNDIFK 380

Human   492 LWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKR-EGFELVMEPEFVNVCFWFVPPSLRGKQESP 555
            |||.|:|:|.:|.|::.|:...|.:|.::.:::: :.|.|::|||.|||.||:||..|||.....
  Fly   381 LWLQWRAKGTEGFEQQQDRLMELVQYQLKRIREQSDRFHLILEPECVNVSFWYVPKRLRGVPHDA 445

Human   556 DYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQDL 620
            .....|.|:.|::|.||:::|::|:||||...|.||||.:::::|:..||:||:|:|:.|||.||
  Fly   446 KKEVELGKICPIIKGRMMQKGTLMVGYQPDDRRPNFFRSIISSAAVNEADVDFMLDEIHRLGDDL 510

Human   621  620
              Fly   511  510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSADXP_024304779.1 DOPA_deC_like 185..616 CDD:99743 187/434 (43%)
Gad1NP_001261396.1 Pyridoxal_deC 64..434 CDD:395219 175/402 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62386
OrthoDB 1 1.010 - - D162307at33208
OrthoFinder 1 1.000 - - FOG0000667
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100596
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X464
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
76.730

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