DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATP5F1B and Kdm5

DIOPT Version :10

Sequence 1:NP_001677.2 Gene:ATP5F1B / 506 HGNCID:830 Length:529 Species:Homo sapiens
Sequence 2:NP_523486.1 Gene:Kdm5 / 33837 FlyBaseID:FBgn0031759 Length:1838 Species:Drosophila melanogaster


Alignment Length:393 Identity:71/393 - (18%)
Similarity:120/393 - (30%) Gaps:144/393 - (36%)


- Green bases have known domain annotations that are detailed below.


Human    83 LNALEVQGRETRLVLEVAQHLGESTVRT------------IAMDGTEGLVRGQK----VLDSGAP 131
            |||..|   |....:.|.|.||.:.|||            :.|:..|..|:...    ::|.||.
  Fly   938 LNAAAV---EAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGAS 999

Human   132 IKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVDLLAPY 196
            :          |.:.|:|           |||........:....|:|:..|.|.|.        
  Fly  1000 V----------RELLVLG-----------KQFVERSESQLQLSLESLEESELETLIN-------- 1035

Human   197 AKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT-----REGNDLYHEMIESGVI 256
                     .|:.:...:..::|:....|....|....|:.|.:     ::..:|.|       |
  Fly  1036 ---------EGSSLRIELQQLDLLQKRLKQCKWYKRSQGLRETSSKLTYQDVKNLLH-------I 1084

Human   257 NLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSAL 321
            ...|.......|..:|.:.....|.:.......|:|||....|..|   ..|.:|.::.|:::  
  Fly  1085 AAADLDPTDPYVDKEMRKLQQIGADIEAWESQAAKYFRRLTQQHEL---GEIEQFLKSASDIN-- 1144

Human   322 LGRIPS-------------------------AVGYQPTLAT-------------DMGTMQERITT 348
             |::||                         .|.|..||..             ::..||..:.:
  Fly  1145 -GQVPSHGLLKDALRKAREWLRAVEQLQQNNHVTYCHTLEAMIERGLNIPIQLEELSRMQGHLNS 1208

Human   349 T------------KKGSITSVQAIYVPADD----------------LTDPAPA---TTFAHLDAT 382
            .            |||:..::..:.:|..|                |.:..||   .:|.|.:..
  Fly  1209 AHQWKDNTACAFLKKGTFYTLLEVLMPRSDAINIDSDLKPRFQDDFLKEKNPAEIVASFKHAEEQ 1273

Human   383 TVL 385
            .:|
  Fly  1274 ELL 1276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATP5F1BNP_001677.2 AtpD 56..526 CDD:439825 71/393 (18%)
Kdm5NP_523486.1 JmjN 160..201 CDD:128818
ARID_JARID 226..312 CDD:350628
PHD1_Lid_like 450..495 CDD:277078
JmjC 624..740 CDD:396791
zf-C5HC2 830..882 CDD:460750
PLU-1 896..1231 CDD:462475 63/346 (18%)
PHD2_KDM5A 1295..1351 CDD:277079
PHD3_KDM5A_like 1755..1805 CDD:277083
Blue background indicates that the domain is not in the aligned region.

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