DRSC/TRiP Functional Genomics Resources

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Protein Alignment: ATP5F1B and lid

Sequence 1:NP_001677.2 Gene:ATP5F1B HGNCID:830 Length:529 Species:Homo sapiens
Sequence 2:NP_001245908.1 Gene:lid FlyBaseID:FBgn0031759 Length:1838 Species:Drosophila melanogaster

Alignment Length:393 Identity:71/394 (18%)
Similarity:120/394 (30%) Gaps:144/394 (37%)


Human    83 LNALEVQGRETRLVLEVAQHLGESTVRT------------IAMDGTEGLVRGQK----VLDSGAP 131
            |||..|   |....:.|.|.||.:.|||            :.|:..|..|:...    ::|.||.
  Fly   938 LNAAAV---EAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGAS 999

Human   132 IKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVDLLAPY 196
            :          |.:.|:|           |||........:....|:|:..|.|.|.        
  Fly  1000 V----------RELLVLG-----------KQFVERSESQLQLSLESLEESELETLIN-------- 1035

Human   197 AKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT-----REGNDLYHEMIESGVI 256
                     .|:.:...:..::|:....|....|....|:.|.:     ::..:|.|       |
  Fly  1036 ---------EGSSLRIELQQLDLLQKRLKQCKWYKRSQGLRETSSKLTYQDVKNLLH-------I 1084

Human   257 NLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSAL 321
            ...|.......|..:|.:.....|.:.......|:|||....|..|   ..|.:|.::.|:::  
  Fly  1085 AAADLDPTDPYVDKEMRKLQQIGADIEAWESQAAKYFRRLTQQHEL---GEIEQFLKSASDIN-- 1144

Human   322 LGRIPS-------------------------AVGYQPTLAT-------------DMGTMQERITT 348
             |::||                         .|.|..||..             ::..||..:.:
  Fly  1145 -GQVPSHGLLKDALRKAREWLRAVEQLQQNNHVTYCHTLEAMIERGLNIPIQLEELSRMQGHLNS 1208

Human   349 T------------KKGSITSVQAIYVPADD----------------LTDPAPA---TTFAHLDAT 382
            .            |||:..::..:.:|..|                |.:..||   .:|.|.:..
  Fly  1209 AHQWKDNTACAFLKKGTFYTLLEVLMPRSDAINIDSDLKPRFQDDFLKEKNPAEIVASFKHAEEQ 1273

Human   383 TVL 385
            .:|
  Fly  1274 ELL 1276

Known Domains:


GeneSequenceDomainRegion External IDIdentity
ATP5F1BNP_001677.2 PRK09280 58..524 CDD:236447 71/394 (18%)
lidNP_001245908.1 JmjN 160..201 CDD:128818
ARID 227..312 CDD:198082
PHD1_Lid_like 450..495 CDD:277078
JmjC 624..740 CDD:202224
zf-C5HC2 830..882 CDD:280996
PLU-1 896..1229 CDD:285609 63/345 (18%)
PHD2_KDM5A 1295..1351 CDD:277079
PHD3_KDM5A_like 1755..1805 CDD:277083
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG0055
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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