DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13056 and CG34268

DIOPT Version :10

Sequence 1:NP_652414.2 Gene:CG13056 / 50267 FlyBaseID:FBgn0040794 Length:99 Species:Drosophila melanogaster
Sequence 2:NP_001097465.1 Gene:CG34268 / 5740141 FlyBaseID:FBgn0085297 Length:83 Species:Drosophila melanogaster


Alignment Length:91 Identity:23/91 - (25%)
Similarity:42/91 - (46%) Gaps:11/91 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MYLSFALLLCLLALGNADLQLYHP---LMTLHHPPTFAKVGHLVEHVPTAVSHQSSTIVHRSVPR 66
            |:...|::..|:|:..|......|   ::.:.......|...:|:||| .|.|   ..|.::||.
  Fly     1 MFRIIAVIFALVAMAFAAPGYIEPSYGVVPVAQVVPVVKSVPVVKHVP-VVQH---VPVVKNVPV 61

  Fly    67 TTSLLTPALRSTYLNYPTWGYPLFDG 92
            ...:  |.|:|..:  ||:|:.::.|
  Fly    62 VQHV--PVLKSYAV--PTYGHHIYHG 83

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13056NP_652414.2 Retinin_C 34..83 CDD:427994 13/48 (27%)
CG34268NP_001097465.1 None

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