DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13056 and CG13043

DIOPT Version :8

Sequence 1:NP_652414.2 Gene:CG13056 / 50267 FlyBaseID:FBgn0040794 Length:99 Species:Drosophila melanogaster
Sequence 2:NP_648868.2 Gene:CG13043 / 39796 FlyBaseID:FBgn0036600 Length:148 Species:Drosophila melanogaster

Alignment Length:74 Identity:27/75 (36%)
Similarity:38/75 (51%) Gaps:7/75 (9%)


  Fly    12 LLCLLALGNADLQLYHPLM-------TLHHPPTFAKVGHLVEHVPTAVSHQSSTIVHRSVPRTTS 69
            ||.:.|.....|....||:       |:...|..||||.:|:.|||||||||.::||........
  Fly    10 LLAVAAARPGHLLESSPLVYAAPAATTIVQEPVLAKVGAVVKSVPTAVSHQSQSVVHSHAHVVED 74

  Fly    70 LLTPALRST 78
            ::.|.::||
  Fly    75 VVAPVVKST 83

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG13056NP_652414.2 Retinin_C 34..>83 CDD:282395 20/46 (43%)
CG13043NP_648868.2 Retinin_C 37..105 CDD:282395 20/48 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR34931
RoundUp 00.000 Not matched by this tool.
11.100

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