DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH16 and Ca12

DIOPT Version :10

Sequence 1:NP_001287620.1 Gene:CAH16 / 50101 FlyBaseID:FBgn0040628 Length:286 Species:Drosophila melanogaster
Sequence 2:XP_063121841.1 Gene:Ca12 / 363085 RGDID:1306612 Length:355 Species:Rattus norvegicus


Alignment Length:295 Identity:84/295 - (28%)
Similarity:143/295 - (48%) Gaps:33/295 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLLLLPLAFYQST----NGMEWNYL--KNGKDWEDLCSS--GKHQSPILLDSRTAR-KWVLPGIT 64
            :|||:.|....|:    ||.:|.|:  ...|:|.....|  |..||||.|.|...: ...|..:.
  Rat    11 VLLLVILKEQPSSSAPLNGSKWTYIGPAGEKNWSKKYPSCGGLLQSPIDLHSDILQYDASLAPLQ 75

  Fly    65 FWHYYRLLKRPFYIRNNGHSISLDI--PVTSNGRKPFITGGRLKGRYYADGLHFHWGSYKS-RGS 126
            |..|...:::...:.|:|||:.|::  .:...|.:|.        :|.|:.||.|||:... .||
  Rat    76 FQGYNVSVEKLLNLTNDGHSVRLNLNSDMYIQGLQPH--------QYRAEQLHLHWGNRNDPHGS 132

  Fly   127 EHLINKRRFDAEIHIVHRN-EKYRNIAQAVRQKDGLAVVAIMVAIVRKDNAKSTPLSRLMEAVVR 190
            ||.::.:.|.||:||||.| :.|.:...|..:.:||||:|:::.|    .:.:....::...:..
  Rat   133 EHTVSGKHFAAELHIVHYNSDLYSDFGSASDKSEGLAVLAVLIEI----GSVNPSYDKIFSHLQH 193

  Fly   191 VPIEDSNATVFGQSSLDQLIGGVSHRDFFTYEGSLTTPLCDETVTWIVF------TETTTVTMSS 249
            |..:.....:.| .::::|: ..|..:::.||||||||.|..||.|.||      ::...:.:.:
  Rat   194 VKYKGQQVLIPG-FNIEELL-PESPGEYYRYEGSLTTPPCYPTVLWTVFRNPVQISQEQLLALET 256

  Fly   250 VSKFWLLRDHWGHRLINNYRIVQDLNNRTVFYKKR 284
            ...|..:.|.....::||:|.||..:.|.|:...|
  Rat   257 ALYFTHMDDPSPREMVNNFRQVQKFDERLVYISFR 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH16NP_001287620.1 Carb_anhydrase 33..281 CDD:459707 74/260 (28%)
Ca12XP_063121841.1 None

Return to query results.
Submit another query.