DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH16 and ca3

DIOPT Version :10

Sequence 1:NP_001287620.1 Gene:CAH16 / 50101 FlyBaseID:FBgn0040628 Length:286 Species:Drosophila melanogaster
Sequence 2:XP_002939197.2 Gene:ca3 / 100496328 XenbaseID:XB-GENE-1007186 Length:262 Species:Xenopus tropicalis


Alignment Length:270 Identity:84/270 - (31%)
Similarity:132/270 - (48%) Gaps:33/270 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 EWNYLK-NGKD-WEDL--CSSGKHQSPILLDSR------TARKWVLPGITFWHYYRLLKRPFYIR 79
            :|.|.. ||.| |.:.  .:.|..||||.|.:|      |.|.|.    :.:|....|.    :.
 Frog     6 DWGYASHNGPDTWAEYFPAAKGDQQSPIELLTRYIKHDPTLRPWT----STYHPSTSLT----VV 62

  Fly    80 NNGHSISLDIPVTSNGRKPFITGGRLKGRYYADGLHFHWGSYKSRGSEHLINKRRFDAEIHIVHR 144
            |:|.:..:....:::  |..|..|.:.|.|....|.|||||....||||:|:..|:..|:|.:|.
 Frog    63 NDGTTCRVVFDDSTD--KSVIKDGPMNGTYRLRQLQFHWGSSDDHGSEHVIDGFRYAGEMHFIHW 125

  Fly   145 NEKYRNIAQAVRQKDGLAVVAIMVAIVRKDNAKSTP-LSRLMEAVVRVPIEDSNATVFGQSSLDQ 208
            |.||.||.:|.:..||:|::|:.:.|     .|:.| |..::||:..:..:...|..   :..|.
 Frog   126 NSKYDNITEAKKHPDGVAIIAVFLKI-----GKAKPHLKLVLEALDCIKNKGKKAHF---TDFDP 182

  Fly   209 LIGGVSHRDFFTYEGSLTTPLCDETVTWIVFTETTTVTMSSVSKF----WLLRDHWGHRLINNYR 269
            .|...|.||::||:||.|||.|:|.|||::.:|..||:...:.||    ..|.......:::|:|
 Frog   183 TILFPSSRDYWTYQGSFTTPPCEECVTWLLLSEPITVSPEQMEKFRSVYSTLEGEIECHMVDNFR 247

  Fly   270 IVQDLNNRTV 279
            ..|.:..|.:
 Frog   248 PPQPVKGREI 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH16NP_001287620.1 Carb_anhydrase 33..281 CDD:459707 80/261 (31%)
ca3XP_002939197.2 alpha_CA 4..261 CDD:469577 84/270 (31%)

Return to query results.
Submit another query.