DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sf3b5 and Sf3b5

DIOPT Version :10

Sequence 1:NP_652189.1 Gene:Sf3b5 / 50007 FlyBaseID:FBgn0040534 Length:85 Species:Drosophila melanogaster
Sequence 2:NP_780311.2 Gene:Sf3b5 / 66125 MGIID:1913375 Length:86 Species:Mus musculus


Alignment Length:85 Identity:70/85 - (82%)
Similarity:77/85 - (90%) Gaps:0/85 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGERYNIHSQLEHLQSKYIGTGHADTTKFEWLTNQHRDSLASYMGHYDILNYFAIAENESKARVR 65
            |.:||.||||||||||||||||||||||:|||.||||||..|||||:|:||||||||||||||||
Mouse     1 MTDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENESKARVR 65

  Fly    66 FNLMERMLQPCGPPPEKLED 85
            |||||:||||.|||.:|.|:
Mouse    66 FNLMEKMLQPSGPPADKPEE 85

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sf3b5NP_652189.1 SF3b10 3..77 CDD:462114 64/73 (88%)
Sf3b5NP_780311.2 SF3b10 3..77 CDD:462114 64/73 (88%)
Interaction with SF3B1 and SF3B3. /evidence=ECO:0000250|UniProtKB:Q9BWJ5 15..76 53/60 (88%)

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