DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15864 and p4ha2

DIOPT Version :10

Sequence 1:NP_652183.2 Gene:CG15864 / 50001 FlyBaseID:FBgn0040528 Length:490 Species:Drosophila melanogaster
Sequence 2:XP_012814344.2 Gene:p4ha2 / 493342 XenbaseID:XB-GENE-957618 Length:537 Species:Xenopus tropicalis


Alignment Length:521 Identity:139/521 - (26%)
Similarity:237/521 - (45%) Gaps:92/521 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 STMELMKLLEVEDELVDNLKGYVKTLKMKFNLMERSLIDMSRENMEMKSDYESYLGNPLNSFRLI 99
            ||.::..|:..|.:|:.:||.|::..:.:.:.::|...::...:....:|.|.|||:|:|:::|:
 Frog    26 STGQMTDLIFRERDLLQSLKEYIREEEERLSKIKRWASEVDELSSRSTADPEGYLGHPVNAYKLV 90

  Fly   100 HRLHTSWRKWYQYAIKVENNALGHIENARLMRKMLPTSSDLQQACRGIHDLMSFYDLKPEELAAG 164
            .|.:|.|.....  :.::::|.|.|.|....|:..||..|...|.|.:..:...|.|.|:.:|.|
 Frog    91 KRFNTDWSSLEN--LVLQDSAKGFIANFTFQREYFPTEEDETGAARALMRIQDTYKLDPDVIAKG 153

  Fly   165 NLAGYSQPGT----GLTAYDCLALGEFSVQKREDDLAEAWYNLSLIRFE-------NKFD----- 213
            .|     |||    .|:|.|...:|:.:....:......|...:|.:.:       ||.|     
 Frog   154 KL-----PGTNYISSLSADDSFGMGKIAYHDGDYYHTVLWMQQALKQMDEGEDAVVNKVDVLDYL 213

  Fly   214 KYRVHKAW----GLLLAKNKQLTDA-----------FYHFENKPEGIIASNEVIHFK-------- 255
            .|.|.:..    .|.|.|.....|.           |...:.|.:..:..||..:.:        
 Frog   214 SYTVFQLGDVPRALELTKRLLALDPNHDRAVNNLKYFEKMQEKQKAELKQNESTNTESATRQPGV 278

  Fly   256 --------------EELSTKQNCAVVVQKPSRLHCRY-NTTTTPFTRIAPLKMEELGLDPYMVVF 305
                          |.|...:...:..::..||.||| |...:|:..::|:|:|:....|.:|.:
 Frog   279 YSRPLDYLPERDVYEALCRGEGVKMNPRRQRRLFCRYHNGNRSPYLILSPVKVEDEWDSPRIVRY 343

  Fly   306 HDVIYDTEI--------------------DGMLNSSNFGLSLTDSGQKSEVRTSKDSYIVDAKTL 350
            .:.:.|.||                    .|:|:.:|:.:|      ||......|..::  ..:
 Frog   344 LNALSDEEIAKIKELAKPKLARATVRDPKTGVLSVANYRVS------KSAWLEENDDPVI--ARV 400

  Fly   351 NERVTDMTGFSMEMSDPFSLINYGLGGHYMLHYDF---HEYTNTTRPKQGDRIATVLFYLGEVDS 412
            |.|:..:||.:::.::...:.|||:||.|..|:||   .|.....|...|:|:||.|.|:.:|::
 Frog   401 NLRMQAITGLTVDTAELLQVANYGMGGQYEPHFDFSRKDEPDVFKRLGTGNRVATFLNYMSDVEA 465

  Fly   413 GGATIFPMINITVTPKKGSAVFWYNLHNSGAMNLKSLHSACPVISGSKYVLTKWINELPQMFVTP 477
            ||||:||.....:.||||:|||||||..||..:.::.|:||||:.|||:|..||.:|..|.|:.|
 Frog   466 GGATVFPDFGAAIWPKKGTAVFWYNLFRSGEGDYRTRHAACPVLVGSKWVSNKWFHERGQEFLRP 530

  Fly   478 C 478
            |
 Frog   531 C 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15864NP_652183.2 P4Ha_N 35..168 CDD:462433 36/132 (27%)
P4Hc 313..467 CDD:214780 60/176 (34%)
p4ha2XP_012814344.2 P4Ha_N 26..157 CDD:462433 36/137 (26%)
BepA 166..>247 CDD:443813 14/80 (18%)
TPR repeat 166..201 CDD:276809 5/34 (15%)
TPR repeat 206..236 CDD:276809 7/29 (24%)
P4Hc 348..521 CDD:214780 62/180 (34%)

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