DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15864 and CG34041

DIOPT Version :10

Sequence 1:NP_652183.2 Gene:CG15864 / 50001 FlyBaseID:FBgn0040528 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001034077.5 Gene:CG34041 / 3885583 FlyBaseID:FBgn0054041 Length:568 Species:Drosophila melanogaster


Alignment Length:349 Identity:74/349 - (21%)
Similarity:160/349 - (45%) Gaps:70/349 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 SACFINCQGFV-----KSNPKKSYAASTMELMKLLEVEDELVDNLKGYVKTLKMKFNLMERSLID 73
            |||.::. |.:     .||.:..::.|..:::.:|::::.:|..|:.|:..|:.|...::.:|||
  Fly   235 SACILSV-GLIIVYLSYSNSENRHSLSKSKVINILKIQENVVKYLENYIYALETKLKTIDEALID 298

  Fly    74 MSRENMEMKSDYESYLGNPLNSFRLIHRLHTSWRKWYQYAIKVENNALGHIENARLM--RKMLPT 136
            ::..:::.:.|..:...:|:.|:.|||.:.:.|..|..:.    ....|..|.|.||  :|.|||
  Fly   299 LATYHIQFERDKLAIASSPVASYSLIHHMQSDWTHWQLFL----QEDPGKDELASLMSIKKYLPT 359

  Fly   137 SSDLQQACRGIHDLMSFYDLKPEELAAGNLAG----YSQPGTGL--------------TAYDCLA 183
            .:|:.:.|.||..:::.|.:..:::|.|.:.|    |......|              :..||:|
  Fly   360 KNDISEVCHGISKMLNAYLMTAQDIANGVILGTQTKYISSALKLEYLYMEIICNRHLMSLRDCVA 424

  Fly   184 LGEFSVQKREDDLAEAWYNLSLIRFENK----------------FDKYRVHKAWGLLLAKNKQLT 232
            |.:.|::.::.:.::.|.|:::...|:.                .:.|...:.|.|.|...:   
  Fly   425 LSDHSMEMKDYNKSKEWLNVAISMLESSAYWDPIVPSADLYLKLAEVYVKQQNWTLALETVE--- 486

  Fly   233 DAFYHFENKPEGIIASNEVIHFKEELS-------------TKQNCAVVVQKPSRLHCRYNT-TTT 283
               :..::.|.    :.::|..::.||             ..:|....::|...|:|.|:| ..|
  Fly   487 ---FALKSNPR----NAQLIRMQKRLSYHILLGPPKSPKLNIENNDYRLRKNGSLYCFYDTKIRT 544

  Fly   284 PFTRIAPLKMEELGLDPYMVVFHD 307
            .::.:||:|.|.|.:||.::::|:
  Fly   545 FYSLLAPIKAEVLFIDPLVILYHE 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15864NP_652183.2 P4Ha_N 35..168 CDD:462433 34/134 (25%)
P4Hc 313..467 CDD:214780
CG34041NP_001034077.5 P4Ha_N 29..138 CDD:462433
P4Ha_N 260..391 CDD:462433 34/134 (25%)
LapB <435..>505 CDD:442196 9/79 (11%)
TPR repeat 452..491 CDD:276809 4/44 (9%)
Blue background indicates that the domain is not in the aligned region.

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