DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15864 and p4ha1

DIOPT Version :10

Sequence 1:NP_652183.2 Gene:CG15864 / 50001 FlyBaseID:FBgn0040528 Length:490 Species:Drosophila melanogaster
Sequence 2:XP_031761963.1 Gene:p4ha1 / 100490484 XenbaseID:XB-GENE-987760 Length:526 Species:Xenopus tropicalis


Alignment Length:539 Identity:156/539 - (28%)
Similarity:244/539 - (45%) Gaps:92/539 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LTLIGFLSACFINCQGFVKSNPKKSYAASTMELMKLLEVEDELVDNLKGYVKTLKMKFNLMERSL 71
            |.|:|..|....:            :..|...::.||..|.:||.:||.|:|..:.|...:::..
 Frog     7 LPLLGLFSCAHAD------------FFTSIGHMIDLLNTEKDLVTSLKDYIKAEEQKLAQIKKWA 59

  Fly    72 IDMSRENMEMKSDYESYLGNPLNSFRLIHRLHTSWRKWYQYAIKVENNAL-----GHIENARLMR 131
            ..:.........|.|.|||:|:|:|:|:.||:|.|       :|:||..|     |.|.|..:.|
 Frog    60 DKLDHLTDTATKDPEGYLGHPVNAFKLMKRLNTEW-------VKLENLILKDISDGFISNLTIQR 117

  Fly   132 KMLPTSSDLQQACRGIHDLMSFYDLKPEELAAGNLAGYSQPGTGLTAYDCLALGEFSVQKREDDL 196
            :..|...|...|.:.:..|...|:|..:.::.|||.|.... |.|||.||..||:.:....:...
 Frog   118 QYFPNDEDQTGAAKALLRLQDTYNLDTDTISKGNLPGVKHK-TSLTAEDCFDLGKTAYTDADYYH 181

  Fly   197 AEAWYNLSLIRF----ENKFDK--------YRVHKAWGLLLAKNKQLTDAFYHFENKPEGIIASN 249
            .|.|...:|.:.    |:..||        |.|::...|    :|.||......|..||....:.
 Frog   182 TELWMEQALSQLDAGEESSLDKVMVLDYLSYAVYQQGDL----DKALTLTKRSLELDPEHQRGNG 242

  Fly   250 EVIHFKEELSTKQNCA---------------------------------VVVQKPSRLHCRY-NT 280
            .:.|...:.|.|.:.:                                 :..::..||.||| :.
 Frog   243 NLRHIMSKESNKSSSSPSEGAELRTRKGRPKDHLEKEKYEKLCRGEGVKMTSRRQKRLFCRYFDG 307

  Fly   281 TTTPFTRIAPLKMEELGLDPYMVVFHDVIYDTEIDGM-------LNSSNFGLSLTDSGQKSEVRT 338
            ...|...::|.|.|:....|.:|.:||:|.|.||..:       |..:.....:|...:.::.|.
 Frog   308 KKDPLLILSPTKQEDEWDKPRIVRYHDIISDEEISKVKELAKPRLRRATISNPITGVLETAQYRI 372

  Fly   339 SKDSYI------VDAKTLNERVTDMTGFSMEMSDPFSLINYGLGGHYMLHYDF-HEYTNTTRPK- 395
            :|.:::      |.|: ||.|:..:||..|..::...:.|||:||.|..|:|| .:|......| 
 Frog   373 TKSAWLSGYEDPVVAR-LNRRIEGVTGLDMSTAEELQVANYGIGGQYEPHFDFLRKYEPDAFKKL 436

  Fly   396 -QGDRIATVLFYLGEVDSGGATIFPMINITVTPKKGSAVFWYNLHNSGAMNLKSLHSACPVISGS 459
             .|:|:||.|||:.:|::||||:||.:...|.||||:|||||||..||..:..:.|:||||:.|:
 Frog   437 GTGNRVATWLFYMSDVEAGGATVFPEVGAAVYPKKGTAVFWYNLLESGEGDYSTRHAACPVLVGN 501

  Fly   460 KYVLTKWINELPQMFVTPC 478
            |:|..|||:|..|.|..||
 Frog   502 KWVSNKWIHERGQEFRRPC 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15864NP_652183.2 P4Ha_N 35..168 CDD:462433 41/137 (30%)
P4Hc 313..467 CDD:214780 62/169 (37%)
p4ha1XP_031761963.1 P4Ha_N 23..154 CDD:462433 41/137 (30%)
NrfG 181..>244 CDD:443378 15/66 (23%)
P4Hc 337..510 CDD:214780 64/173 (37%)

Return to query results.
Submit another query.