DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Catr and ctnna2

DIOPT Version :10

Sequence 1:NP_726389.4 Gene:alpha-Catr / 49713 FlyBaseID:FBgn0029105 Length:810 Species:Drosophila melanogaster
Sequence 2:XP_005160129.1 Gene:ctnna2 / 567500 ZFINID:ZDB-GENE-060815-3 Length:905 Species:Danio rerio


Alignment Length:863 Identity:186/863 - (21%)
Similarity:337/863 - (39%) Gaps:221/863 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 HLLNIAVER----FITIGEIIAEENIDIKGDMYEAAKEARDAGKSI----ERLCDISPLSGMELR 89
            |:|.::||:    |:..||.||:::.|:|.::..|.::.|..|.::    ....| .|.|.::  
Zfish    58 HVLAVSVEQATQNFLEKGEQIAKDSQDLKEELIAAVEDVRKQGDTMRVASSEFAD-DPCSSVK-- 119

  Fly    90 HHIEPLKDYGAIILAARSLLSSVTRILLLVDIIVVKKLLTAKKRASESLEKLESVMNFTEFVRAF 154
                    .|.::.|||:|||:|||:|:|.|:..|.:||...|...|:||.:::..|..:....|
Zfish   120 --------RGTMVRAARALLSAVTRLLILADMADVMRLLAHLKIVEEALEAVKNATNEQDLANRF 176

  Fly   155 SVFGTEMIELAYLTGHHRNSFKEERRRAQMFSARQILEKSIAILLTSSKNSLIHSDCVIVKENRD 219
            ..||.||::|.|:....:...|:.:.|.:|.:||..|:|:..:|.|:|:..|.|.|....:.|||
Zfish   177 KEFGKEMVKLNYVAARRQQELKDPQCRDEMAAARGALKKNATMLYTASQAFLRHPDVAATRANRD 241

  Fly   220 TVFCQIRRAMDLIHFVVKDSIFDTAKHMPFEKQASNPNYENESIYTTIKRIVNLIKRYKYQMSYY 284
            .||.|::.|:        ..|..:|       ||::|..|...                     :
Zfish   242 YVFKQVQEAI--------GGISSSA-------QATSPTDEKHG---------------------H 270

  Fly   285 EGSGE---GNNNSDAYFSFLDDDLWKS--------EKNLPSAAGGGRMVNNTNF-----RKHLSS 333
            .|.||   ..|..|.  ..:.|.|..|        |:.|.|...|..::.:::.     |:.:.:
Zfish   271 AGIGELAAALNEFDN--KIILDPLTFSEARFRPSLEERLESIISGAALMADSSCTRDDRRERIVA 333

  Fly   334 ESLDLR--------------------EELSLAFEKLFEKAHDFTDSPYISHNHRKNILSYCDNCK 378
            |...:|                    :.|:.|.:|:.:|..|      :....||.::.:..:..
Zfish   334 ECNAVRQALQDLLSEYMNNTGRKEKGDPLNSAIDKMTKKTRD------LRRQLRKAVMDHISDSF 392

  Fly   379 LEFDLYLNTIMKDQHEGGGGAGGVGGVGGGQVK---------------------GRSDPELGM-- 420
            ||.::.|..:::....|          ...:||                     ..|:.|.|:  
Zfish   393 LETNVPLLVLIEAAKSG----------NEKEVKEYAQVFREHANKLVEVANLACSISNNEEGVKL 447

  Fly   421 ----LSSLEELCKQLV------------------------------------VSVSSQIEDF--- 442
                .:.::.||.|::                                    |...:.::||   
Zfish   448 VRMAATQIDSLCPQVINAALTLAARPQSKVAQDNMDVFKDQWEKQVRILTEAVDDITSVDDFLSV 512

  Fly   443 --NESLKICSKLVKSFHVLATNYDIDNLNQRSSKFHDCCDHIFDICKL-LQHIAP---TERLQVQ 501
              |..|:..:|.|    :.....|:|.|::.:.........:..|... :::..|   |||:...
Zfish   513 SENHILEDVNKCV----IALQEGDVDTLDRTAGAIRGRAARVVHIINAEMENYEPGVYTERVLES 573

  Fly   502 AKCLAIN-LRIYGPQVFIAAKILWKYSNSSAANENFE--SFSDMWKWLTNEISMIAKKILVSINT 563
            .|.|:.. :..:..||.:|.:.|     |::..:.||  .|.|..:.:.:.:..|.|.:|:....
Zfish   574 IKLLSETVMPRFAEQVEVAIEAL-----STSPPQPFEENEFIDASRLVYDGVRDIRKAVLMIRTP 633

  Fly   564 TKGDRDADAEK----------CESSSDKL--------TKSGVPATEDGEMVEYSGLEGKNNGDLN 610
            .:.:.|:|.|:          .::..|:|        ..:.:|..|..::.|......:....|:
Zfish   634 EELEDDSDFEQEDYDARSRTSIQTEDDQLIAGQSARAIMAQLPQEEKAKIAEQVESFRQEKSKLD 698

  Fly   611 TYQSKWSEDLSDDNDILKRAKNMSAMAFLMYQFTKGNGSLRTTQDLFTQAEYFAEEANRLYKVLR 675
            ...:||.:   :.|||:..||.|..:...|..||:|.|.|:.:.|:...|:..||..:|:.|:.|
Zfish   699 AEVAKWDD---NGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNSSDVINAAKKIAEAGSRMDKLAR 760

  Fly   676 HFSYQVPASDNKKDLLNILDRVPTFVQALQF--TVKDHTVGKAATFV-----KVDHVIRETKNLM 733
            ..:.|.|.|..|:|||..|.|:..:...|..  .||..........:     ....:|:..||||
Zfish   761 AVADQCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELIVSGLDSATSLIQAAKNLM 825

  Fly   734 NVINKVVSKCFECATKYK 751
            |.:...|...:..:|||:
Zfish   826 NAVVLTVKASYVASTKYQ 843

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-CatrNP_726389.4 Vinculin 38..755 CDD:460040 184/858 (21%)
ctnna2XP_005160129.1 Vinculin 18..866 CDD:460040 186/863 (22%)

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