Protein Alignment: alpha-Catr and Vcl

• Sequence 1: NP_726389.4
• Gene: alpha-Catr
• FlyBaseID: FBgn0029105
• Length: 810
• Species: Drosophila melanogaster
• Sequence 2: XP_006251701.2
• Gene: Vcl
• RGDID: 1311217
• Length: 1134
• Species: Rattus norvegicus
• Alignment Length: 1131
• Identity: 169/1132 (15%)
• Similarity: 320/1132 (28%)
• Gaps: 467/1132 (41%)

  Fly    38 AVERFITIGEIIAEENID--IKGDMYEAAKEARDAGKSIERLCDISPLSGMELRHHIEPLKDYGA 100
            ||...:.:|:...:...|  :|.||..|..:..:|...:.:...:     ::...:..|.:||
  Rat    50 AVSNLVRVGKETVQTTEDQILKRDMPPAFIKVENACTKLVQAAQM-----LQSDPYSVPARDY-- 107

  Fly   101 IILAARSLLSSVTRILLLVDIIVVKKLLTAKKRASESLEKLESVMNFTEFVRAFSVFGTEMIELA 165
            :|..:|.:||..:.:||..|...|:|::...|...|.|...|.|....:.|......|..|.::|
  Rat   108 LIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMA 172

  Fly   166 YLTGHHRNSFKEERRRAQMFSARQILEKSIAILLTSSKNSLIHSDCVIVKENRDTVFCQIRRAMD 230
            .:....:.....:..|..:.::...:::.:.:|:::.|
  Rat   173 KMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAMK--------------------------- 210

  Fly   231 LIHFVVKDSIFDTAKHMPFEKQASNPNYENESIYTTIKRIVNLIKRYKYQMSYYEGSGEGNNNSD 295
             |....|:|     |:...|:...|.|:....:...|..|:.::     |::.::.....:.:::
  Rat   211 -IFVTTKNS-----KNQGIEEALKNRNFTVGKMSAEINEIIRVL-----QLTSWDEDAWASKDTE 264

  Fly   296 AY---FSFLDDDL-----WKSEKNL-PSAAG------------------GGR----MVNNTNFRK 329
            |.   .:.:|..|     |..:.|. |..||                  .|:    ::.......
  Rat   265 AMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLG 329

  Fly   330 HLSSESLDLR---------------------EELSLAFEKLFEKAHDFTDSPY-------ISHN- 365
            .::.:..|||                     :.|:...|....|....|:|..       .:.|
  Rat   330 QMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNW 394

  Fly   366 -------------------HRKNILSYCDNCKLEFDLY--------LNTIMKDQHEGGGG----- 398
                               ..:.|...||:.|...|:.        |.:.:.|....|.|
  Rat   395 LADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEA 459

  Fly   399 ----------------------------------AGGV--------------GGVGGGQVKG--- 412
                                              .|.:              .|||...::|
  Rat   460 RALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVA 524

  Fly   413 -------------RSDPELGMLSSLEELCKQL-------------VVSVSSQIEDFNESLKI--- 448
                         |.| .|.....:::|..||             ..:::||::|..:.||.
  Rat   525 EGHRLANVMMGPYRQD-LLAKCDRVDQLAAQLADLAARGEGESPQARALASQLQDSLKDLKTQMQ 588

  Fly   449 -------------CSKLVKSFHVLAT-NYDIDN----LNQRSSKFHDCCDHIFDICKLLQHI--- 492
                         .:..:|...|.|| ..|..|    .::|::.|.:....:....:....:
  Rat   589 EAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGAA 653

  Fly   493 --APTERLQVQAKCLAINLRIYGPQVFIAAKILWKYSNSSAANENFESFSDMW------------ 543
              :..|.:|...|    ..|...|||..||:||.:...:.||.|:||:..:.|
  Rat   654 NKSTVEGIQASVK----TARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714

  Fly   544 --------------------------------KWLTNEISMIAKK----ILVSINTTKGDRDAD- 571
                                            :.|....:.||::    :||:....:...|..
  Rat   715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKF 779

  Fly   572 AEKCESSSDKLTK---------------------------SGV---------------------- 587
            .|..:::||:|:|                           ||.
  Rat   780 REAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEPDFPP 844

  Fly   588 ---------------------------------PATEDGEMVEYSGLEGKNN------GDLNTYQ 613
                                             |..:|.|..|....|..|.      ..|:...
  Rat   845 PPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMMAARQLHDEA 909

  Fly   614 SKWS-----------------------------EDLSDD-------------------------- 623
            .|||                             .|:.||
  Rat   910 RKWSSKPGLPAAQVGIGVVAEADAADAVGFPFPSDMEDDSEPELLLVPANQPVNQPILAAAQSLH 974

  Fly   624 ----------NDILKRAKNMSAMAFLMYQFTKGNGSLRTTQDLFTQAEYFAEEANRLYKVLRHFS 678
                      |||:..||.|:.:...|.:..:|...  |.:.|...|:..|:.::.:.::.:..:
  Rat   975 REATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSG--TKRALIQCAKDIAKASDEVTRLAKEVA 1037

  Fly   679 YQVPASDNKKDLLNILDRVPTFVQALQF--TVKDHTVGKA---------ATFVKVDHVIRETKNL 732
            .|......:.:||.:.:|:||....|:.  |||...:|:.         ||    :.::...:||
  Rat  1038 KQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT----EMLVHNAQNL 1098

  Fly   733 MNVINKVVSKCFECATKYKLNLTGIT 758
            |..:.:.|.:....:.|.:.: .|.|
  Rat  1099 MQSVKETVREAEAASIKIRTD-AGFT 1123

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
alpha-Catr	NP_726389.4	Vinculin	52..755	CDD:279395	164/1113 (15%)
Vcl	XP_006251701.2	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	1	0.900				E1_KOG3681
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900