DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alpha-Catr and ctnnal1

DIOPT Version :10

Sequence 1:NP_726389.4 Gene:alpha-Catr / 49713 FlyBaseID:FBgn0029105 Length:810 Species:Drosophila melanogaster
Sequence 2:NP_001137526.1 Gene:ctnnal1 / 100034581 ZFINID:ZDB-GENE-060503-507 Length:754 Species:Danio rerio


Alignment Length:764 Identity:209/764 - (27%)
Similarity:363/764 - (47%) Gaps:123/764 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 STVNNQRFRVRDMDNEQIMSTFGNIGHLLNIAVERFITIGEIIAEENIDIKGDMYEAAKEARDAG 71
            :|:.|.:.:::  ..|:.:.....:|..:::||.||:.:||.||.||.|:|.:|..|..|||.||
Zfish    34 TTLINHKDKLK--KTEKTLRAIQRVGQAVSVAVGRFVAVGEAIAAENEDLKEEMGLACFEARRAG 96

  Fly    72 KSIERLCDISPLSGMELRHHIEPLKDYGAIILAARSLLSSVTRILLLVDIIVVKKLLTAKKRASE 136
            ..|.:|.|:|.|...:.........|...::.|||.||||||::|:|.|.||:|::::::.:...
Zfish    97 TGIAQLTDVSSLEHCDGDGRSTVFSDRTGMVKAARMLLSSVTKVLVLADCIVIKQIISSRNKVLV 161

  Fly   137 SLEKLESVMNFTEFVRAFSVFGTEMIELAYLTGHHRNSFKEERRRAQMFSARQILEKSIAILLTS 201
            :||:||.|..|.|||:.||.||.||:|.|:|||..:|..|:|::||:|.:||.:|||...:|||:
Zfish   162 TLEQLERVSTFQEFVQIFSQFGNEMVEFAHLTGDRQNDLKDEKKRARMAAARAVLEKCTMMLLTA 226

  Fly   202 SKNSLIHSDCVIVKENRDTVFCQIRRAMDLIHFVVKDS-IFDTAKHMPFEKQASNPNYENESIYT 265
            ||..|.|.||...:.|::.||.::|.|::.:..:|.|: ....||.:|.            |||.
Zfish   227 SKTCLRHPDCESARINKEAVFQRMRIALEQVIEIVTDTRSSGEAKALPV------------SIYA 279

  Fly   266 TIKRI---VNLIKRYKYQMSYYEGSGEGNNNSDAYFSFLDDDLWKSEKNLPSAAGGGRMVNNTNF 327
            .||..   |..::...|.:|.                                            
Zfish   280 GIKDFKVKVEALRDSLYGVSC-------------------------------------------- 300

  Fly   328 RKHLSSESLDLREELSLAFEKLFEKAHDFTDSPYISHNHRKNILSYCDNCKLEFDLYLNTIMKDQ 392
                        |.::...|.|.||..|||||.|..|..|:.|:..|...:.|....:||....|
Zfish   301 ------------EAVAAQLEALVEKTEDFTDSAYTRHEQRETIIQLCQITRQETKQLINTWRHAQ 353

  Fly   393 HEGGGGAGGVGGVGGGQVKGR---SDPELGML------SSLEELCKQLVVSVSSQIEDFNESLKI 448
                            .:|.:   .:.||.:|      |.|.:...::.|..::::      ||:
Zfish   354 ----------------SLKAKEATDEMELSILKTCQCVSDLRQELHKVAVGRATEL------LKL 396

  Fly   449 CSK--LVKSFHVLATNYDIDNLNQRSSKFHDCCDHIFDICKLLQHIAPTERLQVQAKCLAINLRI 511
            .|.  ::::......:.:::.:...:|...:..:.:.:.|:||.|::.||.|::.........|:
Zfish   397 HSDHLVLQALKASGGDGNLEAVADYASTLTEHNEQLVETCRLLCHVSGTEPLEITCIHAEETFRV 461

  Fly   512 YGPQVFIAAKILWKYSNSSAANENFESFSDMWKWLTNEISMIAKKILVSINTTKGDR----DADA 572
            .|||:..||:.|..:..|..|.||.:.|.:.|:....:::::.|:|.......:||:    ....
Zfish   462 IGPQIISAAQTLALHPTSKIAKENLDVFCEAWESQLCDMAILLKEINDVFEGRRGDKKTYLSLPR 526

  Fly   573 EKCESSSDKLTKSGVPATEDGEMVEYSGLE-GKNNGDLNTYQSKWSEDLSDDNDILKRAKNMSAM 636
            ....|::.|..|:.....|:...:...||| .....|:::...:|.|   .|:::::..:.:|:|
Zfish   527 PGKHSANLKTVKAAKLDAEEQTTIAKLGLELCLLTSDVDSEVERWDE---QDHEMVRLCQIISSM 588

  Fly   637 AFLMYQFTKGNGSLRTTQDLFTQAEYFAEEANRLYKVLRHFSYQVPASDNKKDLLNILDRVPTFV 701
            |:.||.||:|.|.|:||.|||.|||..:::..:|..||:..|.|: ..:::..:::..:::.:..
Zfish   589 AYSMYLFTRGEGLLKTTSDLFHQAEVLSDQGLQLCPVLQSLSTQL-LDEDRMLIISETEKLSSAC 652

  Fly   702 QALQFTVKDHTVGKAATFVKVDHVIRETKN-------LMNVINKVVSKC 743
            |.||...|....||:|.|.|||..|:.||.       |:.:.||::.||
Zfish   653 QQLQACAKTPVQGKSAIFQKVDSSIQNTKGILILVVYLLPICNKLIRKC 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-CatrNP_726389.4 Vinculin 38..755 CDD:460040 205/733 (28%)
ctnnal1NP_001137526.1 Vinculin 16..>510 CDD:460040 154/567 (27%)

Return to query results.
Submit another query.