DRSC/TRiP Functional Genomics Resources

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Protein Alignment drm and bowl

DIOPT Version :10

Sequence 1:NP_001285590.1 Gene:drm / 49638 FlyBaseID:FBgn0024244 Length:88 Species:Drosophila melanogaster
Sequence 2:NP_476883.1 Gene:bowl / 33602 FlyBaseID:FBgn0004893 Length:744 Species:Drosophila melanogaster


Alignment Length:74 Identity:39/74 - (52%)
Similarity:52/74 - (70%) Gaps:8/74 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RKMRPKCEFICKYCQRRFTKPYNLMIHERTHKSPEITYSCEVCGKYFKQRDNLRQHRNLH----- 77
            |..|||.:||||:|.|:|||.|||:|||||| :.|..|||::|||.|:::|:||.||.:|     
  Fly   230 RASRPKKQFICKFCNRQFTKSYNLLIHERTH-TDERPYSCDICGKAFRRQDHLRDHRYIHSKEKP 293

  Fly    78 --MDTCGRG 84
              ...||:|
  Fly   294 FKCTECGKG 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drmNP_001285590.1 C2H2 Zn finger 28..48 CDD:275368 14/19 (74%)
C2H2 Zn finger 57..77 CDD:275368 10/19 (53%)
bowlNP_476883.1 COG5048 <232..372 CDD:227381 38/72 (53%)
C2H2 Zn finger 240..260 CDD:275368 14/19 (74%)
C2H2 Zn finger 268..288 CDD:275368 10/19 (53%)
C2H2 Zn finger 296..316 CDD:275368 3/7 (43%)
C2H2 Zn finger 324..344 CDD:275368
C2H2 Zn finger 352..372 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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