DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment drm and odd-2

DIOPT Version :10

Sequence 1:NP_001285590.1 Gene:drm / 49638 FlyBaseID:FBgn0024244 Length:88 Species:Drosophila melanogaster
Sequence 2:NP_509032.1 Gene:odd-2 / 183219 WormBaseID:WBGene00003846 Length:254 Species:Caenorhabditis elegans


Alignment Length:74 Identity:41/74 - (55%)
Similarity:52/74 - (70%) Gaps:8/74 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RKMRPKCEFICKYCQRRFTKPYNLMIHERTHKSPEITYSCEVCGKYFKQRDNLRQHRNLHM---- 78
            |..|||.|||||||.|.|||.|||:|||||| :.|..|||:||||.|:::|:||.|:.:|.    
 Worm   116 RAARPKKEFICKYCDRHFTKSYNLLIHERTH-TDERPYSCDVCGKAFRRQDHLRDHKYIHQKDRP 179

  Fly    79 ---DTCGRG 84
               :.||:|
 Worm   180 FKCEICGKG 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
drmNP_001285590.1 C2H2 Zn finger 28..48 CDD:275368 15/19 (79%)
C2H2 Zn finger 57..77 CDD:275368 10/19 (53%)
odd-2NP_509032.1 zf-C2H2 124..146 CDD:395048 17/21 (81%)
C2H2 Zn finger 126..146 CDD:275368 15/19 (79%)
zf-H2C2_2 138..163 CDD:463886 17/25 (68%)
SFP1 <148..202 CDD:227516 17/41 (41%)
C2H2 Zn finger 154..174 CDD:275368 10/19 (53%)
C2H2 Zn finger 182..202 CDD:275368 3/7 (43%)

Return to query results.
Submit another query.