DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Bb and Foxred1

DIOPT Version :10

Sequence 1:NP_536791.1 Gene:l(2)37Bb / 49427 FlyBaseID:FBgn0002021 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001406862.1 Gene:Foxred1 / 315547 RGDID:1311785 Length:487 Species:Rattus norvegicus


Alignment Length:489 Identity:180/489 - (36%)
Similarity:277/489 - (56%) Gaps:59/489 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 NDMRKVKEFFVPKEP-----ETEKVPIPTQSQFHFSGERDKSKEATVPDDFQTHCDVLIIGGGGV 108
            :|.:|..|..:|.:.     :|..:| |.||                        ||:|||||.:
  Rat    35 SDFKKKIESILPGKQCEMVYDTSHLP-PEQS------------------------DVVIIGGGIL 74

  Fly   109 GSSIAYWLK--EKARDGLNVVVVEKDDTYAQ-SATRVSVGGLCQQFSLPENIQMSLFAADFLRSA 170
            |.|:|:|||  |..|..:.|:|||:|.||:: |:|..||||:.||||:|||:|:|||:.:|||:.
  Rat    75 GLSVAFWLKKLESRRGAMQVLVVEQDHTYSRASSTGPSVGGIWQQFSVPENVQLSLFSINFLRNI 139

  Fly   171 RKHF----GEEVPLQFTPHGHLMLAGEEHAESLKRSSQLQNELGARNELLTADRLTARFPWLNTK 231
            .::.    ...|.|:|.|.|.|:||.|:.|.:|:.:.::|.:.||:..|::.:::..:|||:|.:
  Rat   140 NEYLAVVDAPPVELRFNPSGCLLLASEKDAATLESNVRMQRQEGAKVCLMSPEQMQNKFPWMNAE 204

  Fly   232 GIALGCLGLEKEGWFNPLALLSNFRRSASGYGAHFISGQVVDF-----EFKSQTDISVVTDLGSN 291
            |:||...|||.||||:..:||...||.....|..|..|:|..|     :.::.|...||  |...
  Rat   205 GVALASYGLENEGWFDAWSLLQGLRRKVQSMGVFFCQGEVTRFITSSNQMETPTGEQVV--LRRI 267

  Fly   292 EGAYTGLEKAVIQLPDGTRRTCKFALCVISAGASSEQIARLARIGVG-PGILR-VPLPINARKRY 354
            ...:..::|::...|      .:.|:.|.:|||.|.|||.||.||.| ||.|: ..||:..||||
  Rat   268 NNVHVKMDKSLEYQP------VECAVVVNAAGAWSGQIAELAGIGKGLPGTLQGTKLPVEPRKRY 326

  Fly   355 MYAINSQAQSAPGMNMPMTIDPSGIFIRRDGLGGNYICVQDSTEEY----NSAMIDPQYFAQHIR 415
            ::..:  ....||:..|:..|.||::.||:|||.||:.....|||.    .:..:|..:|...:.
  Rat   327 VHLWH--CPQGPGLETPLVADISGVYFRREGLGSNYLGGCSPTEEEEPDPTNLEVDHDFFQNKVW 389

  Fly   416 PHLYNRIPVLGEAQVVDSWAGCYDHNVYDENGILGAHPYYNNLYLATGFSGHGVQQSLAVGRAIS 480
            |||..|:|.....:|..:|||.||:|.:|:||::|.||...|:|.||||||.|:|.:..:|||::
  Rat   390 PHLVQRVPSFKTLKVQSAWAGYYDYNTFDQNGVVGPHPLVVNMYFATGFSGRGLQHAPGIGRAVA 454

  Fly   481 ELIMDGQFRTIDLSRLSFDRLIVDQPMFELNNVL 514
            |:|::|.|:|||:|...|.|..:.:.:.| :|:|
  Rat   455 EMILEGHFKTIDMSPFLFTRFYLGEKLQE-HNIL 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37BbNP_536791.1 DadA 113..500 CDD:440429 158/404 (39%)
Foxred1NP_001406862.1 DadA 65..474 CDD:440429 167/418 (40%)

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