DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL4 and Mrpl4

DIOPT Version :10

Sequence 1:NP_524939.1 Gene:mRpL4 / 49425 FlyBaseID:FBgn0001995 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_001344828.1 Gene:Mrpl4 / 66163 MGIID:2137210 Length:300 Species:Mus musculus


Alignment Length:245 Identity:107/245 - (43%)
Similarity:144/245 - (58%) Gaps:34/245 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 LPVSRNTARQAWIENTDAVAERKVGLIELHPDVFAAQPRVDIIQENVEWQSKYRYVSMAHTKTRA 121
            :||.|... |||:|:.....:.::||.||||||||..||:||:.:...||..:|.:|.|:|||||
Mouse    55 IPVHRRPV-QAWVESLRGFEQERIGLAELHPDVFATAPRLDIVHQVAIWQRNFRRISYANTKTRA 118

  Fly   122 EVRGGGRKPWPQKGGGRARHGS---------LRS----------PMLKGGGVVHGPRSPTTHFYM 167
            |:.             ...|.:         |||          ..:..|||.||||.||:::||
Mouse   119 ELL-------------NITHSNTLCQPSSKFLRSQTSGDTNTSYATVPAGGVAHGPRGPTSYYYM 170

  Fly   168 LPFYKRVLGLTSTLSVKLAQDDLHIIDNVDIPTGDAEFLKDLIAERNWGPSVLIVDEDH-MFPAN 231
            ||...|.|||...|:|||.||||||:|::::||.|.::|.:|...|:||.|||:||..| ..|.|
Mouse   171 LPMKVRALGLKVALTVKLMQDDLHIVDSLELPTADPQYLTELAQYRHWGSSVLLVDLTHEEMPKN 235

  Fly   232 ICQASDDLGYVNLMPTFGLNVYSMLKHDTLVLTVAAVKHLEQRLLYQLNR 281
            :..|:..|...||:|..||||||||||.|||||:.:|..||.:||:|.:|
Mouse   236 VVAATSGLNSFNLIPAVGLNVYSMLKHQTLVLTLPSVAFLEDKLLWQDSR 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL4NP_524939.1 Ribosomal_L4 83..274 CDD:425758 94/210 (45%)
Mrpl4NP_001344828.1 Ribosomal_L4 81..278 CDD:425758 94/209 (45%)

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