DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL4 and mrpl-4

DIOPT Version :10

Sequence 1:NP_524939.1 Gene:mRpL4 / 49425 FlyBaseID:FBgn0001995 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_505181.1 Gene:mrpl-4 / 179230 WormBaseID:WBGene00020717 Length:299 Species:Caenorhabditis elegans


Alignment Length:223 Identity:103/223 - (46%)
Similarity:148/223 - (66%) Gaps:1/223 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 QAWIENTDAVAERKVGLIELHPDVFAAQPRVDIIQENVEWQSKYRYVSMAHTKTRAEVRGGGRKP 130
            |||:.|.|.:.:.|:||::||||:|...||:||:..|:.|||.||.|.|....|:||:.||||||
 Worm    50 QAWVSNLDTIEDEKLGLVDLHPDIFRTSPRIDILHRNLTWQSVYRNVQMTKMLTKAEMPGGGRKP 114

  Fly   131 WPQKGGGRARHGSLRSPMLKGGGVVHGPRSPTTHFYMLPFYKRVLGLTSTLSVKLAQDDLHIIDN 195
            ||||..|||..||:|||....||..:|.|.|.|.|||||...|:.||...|::|..||||||:|.
 Worm   115 WPQKKTGRAHVGSIRSPQFIRGGFANGVRGPRTWFYMLPDAVRIQGLCVALTLKHTQDDLHIVDK 179

  Fly   196 V-DIPTGDAEFLKDLIAERNWGPSVLIVDEDHMFPANICQASDDLGYVNLMPTFGLNVYSMLKHD 259
            : ::..||.::..||...||:|.|||.||:.......:.:|...|.::|:||.:|||.:|::|:|
 Worm   180 IQNLQNGDPKYWIDLCEARNYGYSVLFVDDCDEISGGLAEAQQALPWLNVMPVYGLNCFSLMKYD 244

  Fly   260 TLVLTVAAVKHLEQRLLYQLNRNDAASK 287
            |:||:.:|::.:|:|||.|::|....:|
 Worm   245 TIVLSRSALERVEERLLTQMHRAGPMNK 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL4NP_524939.1 Ribosomal_L4 83..274 CDD:425758 89/191 (47%)
mrpl-4NP_505181.1 Ribosomal_L4 67..259 CDD:425758 89/191 (47%)

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