Protein Alignment Pp1-87B and rdgC

DIOPT Version :10

• Sequence 1: NP_524937.1
• Gene: Pp1-87B / 49260
• FlyBaseID: FBgn0004103
• Length: 302
• Species: Drosophila melanogaster
• Sequence 2: NP_536738.3
• Gene: rdgC / 40224
• FlyBaseID: FBgn0265959
• Length: 746
• Species: Drosophila melanogaster
• Alignment Length: 335
• Identity: 109/335 - (32%)
• Similarity: 169/335 - (50%)
• Gaps: 40/335 - (11%)

  Fly     2 GDVMN-----------IDSIISRLLEVRGAR--PGKNVQLSEGEIRGLCLKSREIFLSQPILLEL 53
            ||::|           ||.:|....:.||.|  | |.|.|.   :|......:::....|:...:
  Fly   174 GDIVNAKIELPIRKNHIDLLIDVFRKKRGNRLHP-KYVALI---LREAAKSLKQLPNISPVSTAV 234

  Fly    54 EAPLKICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGDYVDRGKQSLETICLLLAYKIKYSENFF 117
            ...:.:|||:||:..|||.:....|.|..|| |:|.||:|||||:.||.:.|||:..:.:....|
  Fly   235 SQQVTVCGDLHGKLDDLLVVLHKNGLPSSSNPYVFNGDFVDRGKRGLEVLLLLLSLYLAFPNAVF 299

  Fly   118 LLRGNHECASINRIYGFYDECKRRY--SIKLWKTFTD-CFNCLPVAAIVDEKIFCCHGGLSPDLT 179
            |.|||||.:.:|..|||..|.:.:|  :.|....|.| .:..||:.::::.::...|||.| |.|
  Fly   300 LNRGNHEDSVMNARYGFIREVESKYPRNHKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFS-DST 363

  Fly   180 SMEQIRRIMR---------------PTDVPDQGLLCDLLWSDPDKDTMGWGEND-RGVSFTFGAE 228
            |::.|:.|.|               |.|..:...:.|::|||| :.|||...|. ||....||.:
  Fly   364 SLDLIKSIDRGKYVSILRPPLTDGEPLDKTEWQQIFDIMWSDP-QATMGCVPNTLRGAGVWFGPD 427

  Fly   229 VVAKFLQKHEFDLICRAHQVVEDGYEFFAKRMLVTLFSAPNYCGEFDNAGAMMSVDDTLMCSF-Q 292
            |...|||:|....:.|:|:...:|:||.....::|:|||.||.....|.||.:.:::.||..| |
  Fly   428 VTDNFLQRHRLSYVIRSHECKPNGHEFMHDNKIITIFSASNYYAIGSNKGAYIRLNNQLMPHFVQ 492

  Fly   293 ILKPADKRKK 302
            .:..|.:.|:
  Fly   493 YISAASQTKR 502

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pp1-87B	NP_524937.1	MPP_PP1_PPKL	6..296	CDD:277359	105/323 (33%)
rdgC	NP_536738.3	IQ	89..111	CDD:197470
		MPP_RdgC	184..494	CDD:277364	104/315 (33%)
		FRQ1	527..681	CDD:444056
		EFh	616..681	CDD:238008