DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp1-87B and F40E3.5

DIOPT Version :10

Sequence 1:NP_524937.1 Gene:Pp1-87B / 49260 FlyBaseID:FBgn0004103 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001370693.1 Gene:F40E3.5 / 171824 WormBaseID:WBGene00018232 Length:344 Species:Caenorhabditis elegans


Alignment Length:334 Identity:86/334 - (25%)
Similarity:142/334 - (42%) Gaps:60/334 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DVMNIDSIISRL-LEVRGARP-GKNVQLSEGEIRGLCLKSREIFLSQPILLELEAPLKICGDIHG 65
            |.::...:||:: ..:|...| |...|.....::.|..||.|:.....:::::..|..|.|.::|
 Worm    23 DKIDYVKLISKIWTYIREYTPDGPRPQFYPEVLKKLLQKSCEVLKQDEMVVKVTGPAVIFGPVYG 87

  Fly    66 QYYDLLRLFEYG-GFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYSENFFLLRGNH-ECASI 128
            :...::.|.... ..|||..|:.||.|:.||...:|.:..||||||.:.|...||:|:| |..||
 Worm    88 EGDSMISLMSLAKKVPPEQTYVMLGCYLGRGFAQIECLVFLLAYKILHPEKVVLLKGHHEESISI 152

  Fly   129 NRIYGFYDECKRRYSIKLW------KTFTDCFNC----------LPVAAIVDEKIFCCHGGLSPD 177
            ..:           .:|.|      :...|...|          :..||::|.||.|..||..|.
 Worm   153 EML-----------KVKEWLMARGIERDVDLEECMIEMKRACSMMSAAAVIDSKILCMPGGPGPT 206

  Fly   178 L--TSMEQIRRIMRPTD-VPDQGLLCDLLWS-----DPDKDTMGWGENDRGVSFTFGAEVVAKFL 234
            :  ..::::..:.:... :.|:.||.:..||     |..||.       .|:.| |..:....|.
 Worm   207 IREKGLQKLVGLKKGVQAIADKKLLMEASWSVLLLDDAQKDM-------HGMPF-FTPQQATDFC 263

  Fly   235 QKHEFDLICRAHQVVEDGYEFFAKRMLVTLFSAPNYCGEFDNAGAMMSVDDTL------------ 287
            :.:....|.|..|:|::|| ....|.:|||.||..|...|.|..|::.||:..            
 Worm   264 KANNLKCIVRGRQMVDEGY-LNKPREVVTLISAVAYLDNFRNHAAVLQVDNDKGKVIRYKMEEGE 327

  Fly   288 MCSFQILKP 296
            ..|.:::||
 Worm   328 QLSLELVKP 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-87BNP_524937.1 MPP_PP1_PPKL 6..296 CDD:277359 83/329 (25%)
F40E3.5NP_001370693.1 PP2Ac 50..338 CDD:197547 79/307 (26%)

Return to query results.
Submit another query.