DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mbs and Ppp1r27

DIOPT Version :10

Sequence 1:NP_001246786.1 Gene:Mbs / 49070 FlyBaseID:FBgn0005536 Length:1273 Species:Drosophila melanogaster
Sequence 2:NP_001099328.1 Gene:Ppp1r27 / 287881 RGDID:1308861 Length:154 Species:Rattus norvegicus


Alignment Length:138 Identity:53/138 - (38%)
Similarity:78/138 - (56%) Gaps:5/138 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RAAPTPRHEH---GRRIKFSSGCVFLAACLSGDKDEVVQLL-DQGADINTANVDGLTALHQACID 89
            |.:|..|...   .|.::|.:..:||.....||.::|.:.: .:...::|....||.|||:|.:.
  Rat    10 RYSPRQRRRRLLADRSVRFPNDVLFLDHIRQGDLEQVGRFIRARKVSLDTIYPSGLAALHEAVLS 74

  Fly    90 DNLDMVEFLVERGADINRQDNEGWTPLHATASCGFVSIARYLVENGADVAAVNSDGDLALDLAID 154
            .||:.|:.||:.||||:::|..||||||...|.|:..|||||:..|||..|.|.||||..|| ||
  Rat    75 GNLECVKLLVKYGADIHQRDETGWTPLHIACSDGYPDIARYLISLGADRDATNDDGDLPSDL-ID 138

  Fly   155 VQHMAMID 162
            .....:::
  Rat   139 PDFKDLVE 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MbsNP_001246786.1 ANKYR 50..300 CDD:440430 48/114 (42%)
ANK repeat 78..109 CDD:293786 15/30 (50%)
ANK repeat 111..142 CDD:293786 17/30 (57%)
ANK repeat 209..239 CDD:293786
ANK repeat 241..272 CDD:293786
IPD_PPP1R12 606..648 CDD:412018
PRKG1_interact 1177..1273 CDD:464927
Ppp1r27NP_001099328.1 ANKYR <33..>133 CDD:440430 43/99 (43%)
ANK repeat 63..94 CDD:293786 15/30 (50%)
ANK repeat 96..127 CDD:293786 17/30 (57%)
Blue background indicates that the domain is not in the aligned region.

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