DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mbs and gfi-2

DIOPT Version :10

Sequence 1:NP_001246786.1 Gene:Mbs / 49070 FlyBaseID:FBgn0005536 Length:1273 Species:Drosophila melanogaster
Sequence 2:NP_001366991.1 Gene:gfi-2 / 172825 WormBaseID:WBGene00001582 Length:480 Species:Caenorhabditis elegans


Alignment Length:439 Identity:133/439 - (30%)
Similarity:212/439 - (48%) Gaps:59/439 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KRAEQLKRWEESDTNRAAPTPRHEHGRRIKFSSGCVFLAACLSGDKDEVVQLLDQGADINTANVD 78
            :|..||:|.:|.:  ||.|.||... :|:.|::....|.|....|..||.:||:..|:.|..|.|
 Worm    28 RRRLQLRRNDERE--RALPPPRPRR-QRLHFAAEVELLEATCRADYAEVERLLNDNANPNLHNDD 89

  Fly    79 GLTALHQACIDDNLDMVEFLVERGADINRQDNEGWTPLHATASCGFVSIARYLVENGADVAAVNS 143
            |||.|||..||||..::..|:||||::|.||.|.||||||.|.|..::|.:.|::.||::.|||:
 Worm    90 GLTPLHQCAIDDNQQIMLLLLERGANVNAQDTEQWTPLHAAACCAHINIVKILIQAGANLLAVNA 154

  Fly   144 DGDLALDLAIDVQHMAMIDYMEKMVQELNIN---VDEARKAEELAMLNDAKKWLRSDAAEVDRPH 205
            :|::..|:.   .|...:|.:|..:....|.   :||.|.|.|.|||:| .|.|.....|:|...
 Worm   155 EGNMPYDIC---DHEETLDVIESEMAARGITQSYIDEMRGAPEKAMLDD-MKMLHQQGRELDARA 215

  Fly   206 PKTGATALHVAAAKGYTKVLGLLLAGRGNVDRQDNDGWTPLHAASHWGQRETAEMLVESLADMDI 270
            | .|:|.||||:|.||..|...||....:...:|||.|.|:|||:.|.|.:..|:|.:...|:..
 Worm   216 P-DGSTYLHVASANGYYDVAAFLLTCSVSPLIRDNDFWQPVHAAACWAQPDLIELLCQYGGDIHA 279

  Fly   271 RNYAGQS----CIDVADRKIVKFLEELRANKR--------NKRRPSSQIRISDAMENHVEKTPTK 323
            :...|::    |.|::.::::..|.:..|.:|        ::|:...:.:.....:.........
 Worm   280 KTKNGETPMDLCEDMSTKQVISQLVQTEARRRRLAFGVRDSRRQSKKRKKFESPQQGATTGDNPF 344

  Fly   324 LVRVEVRTDATKDAENVKP---------------------NQQIH----AVEHPVEEEAPWRRKL 363
            ..|..:|..:.:|...:.|                     :..:|    :::|  :.|:|.:|.|
 Worm   345 SARGAIRRQSLRDRSGLTPARIEAQKEGADILRTWSKEDVSADVHSSQGSLQH--QRESPSKRVL 407

  Fly   364 PRTPSDSPTNNQV----PD---RELGTNSSETANDVILRRTQSFENDQK 405
             :....|..|.|.    ||   |:|.||:.:.. |...:|:.|....||
 Worm   408 -KYYFQSSQNKQAKPMSPDEWLRKLETNADDDL-DTTPKRSGSTRRRQK 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MbsNP_001246786.1 ANKYR 50..300 CDD:440430 96/264 (36%)
ANK repeat 78..109 CDD:293786 17/30 (57%)
ANK repeat 111..142 CDD:293786 14/30 (47%)
ANK repeat 209..239 CDD:293786 12/29 (41%)
ANK repeat 241..272 CDD:293786 11/30 (37%)
IPD_PPP1R12 606..648 CDD:412018
PRKG1_interact 1177..1273 CDD:464927
gfi-2NP_001366991.1 ANKYR 5..290 CDD:440430 103/269 (38%)
ANK repeat 61..87 CDD:293786 9/25 (36%)
ANK repeat 89..120 CDD:293786 17/30 (57%)
ANK repeat 122..153 CDD:293786 14/30 (47%)
ANK repeat 217..248 CDD:293786 12/30 (40%)
ANK repeat 250..281 CDD:293786 11/30 (37%)
Blue background indicates that the domain is not in the aligned region.

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